Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g1290 ATGTTGGGAAGCGGGGGGTTTTCGGACGGGTACGAGGTTGGCTCAAAGAGACAAAGAATGATGGAATCCAATCCATACTTCGCAGTGAGCAGCGGAACAGGCAGCTTACCATACGGATACGCTGGTGGCTTCCAGCCGCCTCCCTTTCCCGTGGTCCGTCTCCGGGGGCTTCCCTTCAACTGCACTGACATCGACATCTTGAAGTTCTTTGCTGGACTCACCATCGTCGATGTCTTGCTGGTCAACAAGAGTGGCCGGTTCTCGGGTGAGGCCTTCGTGGTCTTTGCAGGATCGATGCAGGTCGAGTTTGCGTTGCAGCGGGATCGCCAGAACATGGGTCGCCGGTATGTGGAGGTGTTCAGGTGCAAGAAGCAGGATTATTACAACGCAGTTGCTGGCGAGATCAATTATGAAGGAATATATGACACCGACTACCATGGTGGTAGTAGCCCTCCGCCCTCCCGGGCGAAGAGGTTCAACGATAAAGACCAAATGGAGTACACTGAAATACTGAAGATGCGTGGCCTTCCGTTCCAAGTGCAAAAGTCTCAGATTGTCGAGTTCTTTAAAGATTTCAAGCTGATAGAAGATAGGGTGCACATTGCATGTCGCCCTGATGGGAAAGCGACTGGAGAGGCATATGTGGAGTTTGTTTCTGCTGATGAGGCTAAGAGGGCGATGTCCAAGGATAAAATGACCATTGGATCAAGGTATGTGGAGCTGTTTCCTTCTACACCAGATGAAGCTAGAAGGGCAGAATCAAGATCAAGGCAGTAA 777 0.5109 MLGSGGFSDGYEVGSKRQRMMESNPYFAVSSGTGSLPYGYAGGFQPPPFPVVRLRGLPFNCTDIDILKFFAGLTIVDVLLVNKSGRFSGEAFVVFAGSMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAGEINYEGIYDTDYHGGSSPPPSRAKRFNDKDQMEYTEILKMRGLPFQVQKSQIVEFFKDFKLIEDRVHIACRPDGKATGEAYVEFVSADEAKRAMSKDKMTIGSRYVELFPSTPDEARRAESRSRQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g1290 258 CDD RRM_hnRNPH_ESRPs_RBM12_like 170 242 - -
Aed7g1290 258 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53 115 IPR000504 GO:0003723
Aed7g1290 258 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 173 239 IPR000504 GO:0003723
Aed7g1290 258 Gene3D - 153 258 IPR012677 -
Aed7g1290 258 Gene3D - 49 133 IPR012677 -
Aed7g1290 258 SUPERFAMILY RNA-binding domain, RBD 42 129 IPR035979 GO:0003676
Aed7g1290 258 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED 3 258 - -
Aed7g1290 258 SUPERFAMILY RNA-binding domain, RBD 168 255 IPR035979 GO:0003676
Aed7g1290 258 SMART rrm1_1 170 242 IPR000504 GO:0003723
Aed7g1290 258 SMART rrm1_1 51 120 IPR000504 GO:0003723
Aed7g1290 258 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 3 258 - -
Aed7g1290 258 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 169 246 IPR000504 GO:0003723
Aed7g1290 258 CDD RRM_hnRNPH_ESRPs_RBM12_like 51 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g1290 Aed-Chr7 10600814 10601590 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g1290 K12898 - gmx:100816391 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g1290 7 10600814 10601590 Aed7g1290 7 10600814 10601590 ECH