Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0687 ATGATGGAGGATTTTTGGAGCATGTTTTGCGTAGAATCTGATTGTCCTGCAGGGACTGGAGGAAAGCCACCTTTCTGTTATTATTTCAAGTTTTTGAAAGATCCTTCTACATGCACCAACCAGTTCTTGATCATTTGCTTTGATGTGCTACTACTGATCATTCTGGCATTCATTTTGATCCAGAACTCTTTATTCAGACGACGATTTTACGGTCAGTTTCGGGTGGAAAGATATTCAAACTTGCAGTTAATTTCTGCCATAACCAATGGCTCTCTGGGGTTGTTGCATTTGTGCTTAGGAATTTGGATTTTAGAGGAGAAGTTAAGGAAGAGTCACACTCTTTTTCCTCTTCATTGGTGGTTGCTAGAACTTTTTCAGGGATTCAGATGGTTGTTAGTAGGCTTAAGTGTAAGTCTTCAGTTGAAACAACTTCCAAGATCATGGTTGTGGTTGTTTTCTCTTCTTACATTATTTGTTTCAACTATTTTCTGTGTTTTATCAATGTCCTATGCAATAAGTAGCAGAGAATTTTCCTTGAAGGAAGCTTTAGATGTTCTGTCTTTTCCAGGGTCAGTTTTACTACTCTTGTGCACTTATAAAGTGTATAAATGTGAAGACACTGGTGGAGAAATTGATGAAGGCCTTTATGACCCTTTAAATGGACACTTCAATGGAATTGATCCTGATAACTATGTAACCCCATTTGCCAAAGCTGGATTCTTTAGTAGGATGTCGTTTTGGTGGTTGAATCCATTGATGAAAAGGGGCCAAGAGAAAACACTTCAGAATGAGGATATCCCAAAGTTGCGAGAATCAGATCGAGCAAAAAGTTGCTATTTGTCATTTTTAGAACAATTGAACAGAGAAAAGGGAAAAGAATCACTATCACAATCATCAGTTTTGTGGACTATAGTTTTGTGCCACAGGAGAGAGATTTTGATGACTGGAATGTTTGCATTGCTCAAGATACTCACCTTGTCTACTGGCCCTGTACTTCTGAATGCATTTATATTGGTTTCTGAGGGTAATGAAAGTTTCAAATATGAGGGTTATGTATTGGTCATATCACTTTTCATTATAAAGATCATAGAGTCCCTATCACAAAGGCAGTGGTATTTCCGCAGTAGGCTTGTTGGGATGAAAGTTAAGGCACTACTTACTGCAGCTATTTATAAAAAACTATTGAGGTTATCCAGTGCAGCTAGATTGACACACTCTGGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTATAGAATTGGAGAATTCCCATATTGGTTTCACCAGTTGTGGACAACAAGCCTCCAAATATGTATTGCATTGGTAATACTTATTAATGCTATTGGGGTAGCAACAATTGCCTCATTGGTGGTGATAGTTCTCACTGTTCTGTGCAATGCTCCACTAGCAAAGTTGCAGCATAAGTTTCAGAGCGAACTCATGGTGGCACAAGATGAGAGATTGAAGGCCAGTACTGAGGCTCTTACGAATATGAAAGTCCTGAAGCTGTATGCATGGGAAACCCATTTTAAAAATGCAATAGAAAGACTAAGAAATGTGGAACTGAAATTGTTAGGTGCAGTGCAATTGAGAAAGGCATACGACATCTTTCTATTTTGGACCTCACCTATTTTGGTCTCTGCTGCTTCTTTTGGAACATGTTACTTCTTAAATATTCCTCTGCATGCAAATAATCTTTTCACATTTGTGGCAACTATACGCCTTGTGCAGGAGCCAATTACAGCCATCCCAGATGTTATCGGGGTGGTCATTCAAGCAAAAGTGGCATTTGCCCGGATTGTTAAATTCCTTGAGGCACCTGAATTGCAAAGTAAAAATTTCAGGAATAGAAATTTTGATGACAGTGTTAAAGGCCCAATTTCAATCAAATCTGCTGACTTTTCATGGGAAGGTAATGTATCAAAGTCAACACTGAGGAACATAAACTTGGAGATCAGACAAGGTCAAAAGTTGGCTATTTGTGGAGAAGTTGGCTCAGGAAAATCAACCATCTTAGCTACAATTCTTGGAGAAGTTCCTATGACAAAGGGAACTATTGAAGTTTATGGAAAGTTTGCATATGTTTCTCAAACAGCATGGATACAGACTGGTACTATACGGGAAAATATTTTGTTTGGATCTGATTTAGATGCTCATAGATATCAAGAAACACTTCGTAGATCTTCACTACTGAAGGACCTGGAGCTGTTTCCCCATAGAGATCTCTCTGAAATAGGTGAGAGGGGAGTTAACTTGAGTGGAGGTCAGAAGCAGCGAATTCAACTTGCACGCGCACTTTATCAGAATGCTGATGTATATCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCCACAAATTTGTTTAATGAATACATTATGGATGGTCTTAAAGAGAAAACTGTTTTACTTGTAACTCATCAAGTTGACTTTCTACCAGCGTTTGATTCTGTTTTGTTGATGTCAAATGGGGAAATCCTAGAAGCTGCTTCTTATCATCATTTGTTGTCCTCAAGCAAAGAATTCCAAGATCTTGTTGATGCTCACAAGAAAACTGCTGGTTCTGACAGGCCTATGAATGTTACTTCTTCCAAGAGACATTCAACATCTTCTATAGAGATTACACAAGCTTTCAAGGAGAAGCAGTTAAAAGCAACAAATGGAAATAAGTTAATAAAGGAAGAAGAGAGAGAGATAGGAGACACAGGGTTGAAGCCTTACATGCAGTATTTGAATCAGACACAAGGCTATATATACTTCTTTGTGGCTTCTCTTTGTCACCTCTTGTTTGTCATTTGCCAGATATTGCAAAACTCATGGATGGCTGCTAATGTGGACAACTCCAAAGTCAGCACATTGCGGTTGATCGTAGTTTACTTCTTGATTGGGGTTGTTTCCGCAATTTTCTTGTTGATCAGAACTCTATTTATTGTTGCCTTGGGTATTCAATCATCAACAAATTTATTTTTAAAGTTAATGAACTCCCTTTTTCGTGCTCCGATGTCCTTCTATGACTCTACACCATTGGGAAGGATACTTAGTAGGGTCTCATCAGATCTAAGCATTATGGATCTTGATATCCCATTTATCATCGCTTTCACTGTGGGAGGTACTACAAACTTCTATTCTAATCTTGCAGTTTTAGCAATTATCACTTGGCAAATCTTGCTTGTCTCTCTACCAATGGTTTACATTGCAATACGCTTGCAGAGATACTATTTTTCTGCTGCAAAAGAAGTAATGCGCATGAATGGCACAACAAAATCCTTTGTAGCTAATCATGTAGCTGAAACTACTGCTGGAGTTGTGACAATAAGAGCCTTTGAAGAAGAAGATCGTTTCTTTGAGAAGAATCTTGATCTAATTGACATCAATGCTAGTCCTTCCTTCCATAGTTTTGCCTCAAATGAGTGGCTGATCCAAAGACTAGAAATAATTAGTGCAGTACTACTTTCCTCCACAGCACTATGCATGGTTATGCTTCCACCTGGGACATTCAGCTCTGGATTCATTGGCATGGCTCTCTCTTATGGCCTTTCACTAAATGCTCAGCTAGTATTTTCAATTCAAAGTCAATGCAATCTTGCAAATTACATAATCTCTGTAGAGAGGCTAAATCAATATATGCATCTACCAAGTGAGGCAGAAGAAGTAATAGAAGGAAATCGTCCTCCTTCAAGTTGGCCAGTTGCTGGTAAAGTAGAGCTAAATGACTTGAAGATACGATACAGGCCCGATGGACCACTTATACTCCATGGAATCACATGCACATTCAAAGCAGGGCACAAGATTGGAATTGTTGGCAGGACAGGCAGTGGGAAATCTACTCTTATCAGTGCTTTATTTCGTCTAGTGGAGCCGGCTGGCGGAAAAATTGTAATTGATGGCATAGACATATCTTCTATCGGCCTTCATGATTTGAGGTCACGTTTTGGTGTTATACCTCAGGATCCTACCCTTTTTAATGGGACTGTTAGATATAATTTGGACCCTTTATCTCAACACTCTGATCACGAGATATGGGAGGTTCTTGGGAAGTTTGTTGAAGATGGATCAAACTGGAGCATGGGACAAAGGCAATTATTTTGTTTGGGGCGTGCACTTTTAAGGAGAAGTAGGATATTGGTGCTGGATGAAGCAACTGCATCAATTGACAATGCAACTGATTTGATTCTGCAGAAAACCATTAGGACTAAGTTTGAAGATTGCACAGTTATCACAGTAGCACACAGGATACCAACTGTGATGGATTGCACTATGGTTCTTTCAATCAGCGATGGAAAATTGGTGGAGTATGATGACCCAACAAGCTTGATGAAGAAAGAAGGATCGCTATTCAAGCAGCTTGTTAGGGAGTACTGGTCTCATTTTCAATCTGCAGAATCACAATGA 4401 0.3915 MMEDFWSMFCVESDCPAGTGGKPPFCYYFKFLKDPSTCTNQFLIICFDVLLLIILAFILIQNSLFRRRFYGQFRVERYSNLQLISAITNGSLGLLHLCLGIWILEEKLRKSHTLFPLHWWLLELFQGFRWLLVGLSVSLQLKQLPRSWLWLFSLLTLFVSTIFCVLSMSYAISSREFSLKEALDVLSFPGSVLLLLCTYKVYKCEDTGGEIDEGLYDPLNGHFNGIDPDNYVTPFAKAGFFSRMSFWWLNPLMKRGQEKTLQNEDIPKLRESDRAKSCYLSFLEQLNREKGKESLSQSSVLWTIVLCHRREILMTGMFALLKILTLSTGPVLLNAFILVSEGNESFKYEGYVLVISLFIIKIIESLSQRQWYFRSRLVGMKVKALLTAAIYKKLLRLSSAARLTHSGGEIMNYVTVDAYRIGEFPYWFHQLWTTSLQICIALVILINAIGVATIASLVVIVLTVLCNAPLAKLQHKFQSELMVAQDERLKASTEALTNMKVLKLYAWETHFKNAIERLRNVELKLLGAVQLRKAYDIFLFWTSPILVSAASFGTCYFLNIPLHANNLFTFVATIRLVQEPITAIPDVIGVVIQAKVAFARIVKFLEAPELQSKNFRNRNFDDSVKGPISIKSADFSWEGNVSKSTLRNINLEIRQGQKLAICGEVGSGKSTILATILGEVPMTKGTIEVYGKFAYVSQTAWIQTGTIRENILFGSDLDAHRYQETLRRSSLLKDLELFPHRDLSEIGERGVNLSGGQKQRIQLARALYQNADVYLLDDPFSAVDAHTATNLFNEYIMDGLKEKTVLLVTHQVDFLPAFDSVLLMSNGEILEAASYHHLLSSSKEFQDLVDAHKKTAGSDRPMNVTSSKRHSTSSIEITQAFKEKQLKATNGNKLIKEEEREIGDTGLKPYMQYLNQTQGYIYFFVASLCHLLFVICQILQNSWMAANVDNSKVSTLRLIVVYFLIGVVSAIFLLIRTLFIVALGIQSSTNLFLKLMNSLFRAPMSFYDSTPLGRILSRVSSDLSIMDLDIPFIIAFTVGGTTNFYSNLAVLAIITWQILLVSLPMVYIAIRLQRYYFSAAKEVMRMNGTTKSFVANHVAETTAGVVTIRAFEEEDRFFEKNLDLIDINASPSFHSFASNEWLIQRLEIISAVLLSSTALCMVMLPPGTFSSGFIGMALSYGLSLNAQLVFSIQSQCNLANYIISVERLNQYMHLPSEAEEVIEGNRPPSSWPVAGKVELNDLKIRYRPDGPLILHGITCTFKAGHKIGIVGRTGSGKSTLISALFRLVEPAGGKIVIDGIDISSIGLHDLRSRFGVIPQDPTLFNGTVRYNLDPLSQHSDHEIWEVLGKFVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTKFEDCTVITVAHRIPTVMDCTMVLSISDGKLVEYDDPTSLMKKEGSLFKQLVREYWSHFQSAESQ 1466
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0687 1466 CDD ABC_6TM_ABCC_D1 315 601 IPR044746 GO:0140359
Aed7g0687 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1227 1452 IPR027417 -
Aed7g0687 1466 Gene3D - 623 857 IPR027417 -
Aed7g0687 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 630 851 IPR003439 GO:0005524
Aed7g0687 1466 Pfam ABC transporter transmembrane region 921 1160 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g0687 1466 Pfam ABC transporter transmembrane region 313 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g0687 1466 ProSitePatterns ABC transporters family signature. 753 767 IPR017871 GO:0005524
Aed7g0687 1466 SMART AAA_5 655 828 IPR003593 -
Aed7g0687 1466 SMART AAA_5 1263 1439 IPR003593 -
Aed7g0687 1466 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 318 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g0687 1466 CDD ABCC_MRP_domain1 628 828 - -
Aed7g0687 1466 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 74 1465 - -
Aed7g0687 1466 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 74 1465 - -
Aed7g0687 1466 Pfam ABC transporter 1254 1385 IPR003439 GO:0005524
Aed7g0687 1466 CDD ABCC_MRP_domain2 1235 1438 - -
Aed7g0687 1466 SUPERFAMILY ABC transporter transmembrane region 920 1217 IPR036640 GO:0005524|GO:0016021
Aed7g0687 1466 Pfam ABC transporter 646 780 IPR003439 GO:0005524
Aed7g0687 1466 Gene3D ABC transporter type 1, transmembrane domain 884 1219 IPR036640 GO:0005524|GO:0016021
Aed7g0687 1466 Gene3D ABC transporter type 1, transmembrane domain 284 610 IPR036640 GO:0005524|GO:0016021
Aed7g0687 1466 SUPERFAMILY ABC transporter transmembrane region 301 606 IPR036640 GO:0005524|GO:0016021
Aed7g0687 1466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 850 IPR027417 -
Aed7g0687 1466 CDD ABC_6TM_ABCC_D2 923 1212 IPR044726 GO:0140359
Aed7g0687 1466 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 924 1200 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed7g0687 1466 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1237 1454 IPR003439 GO:0005524
Aed7g0687 1466 Gene3D - 1221 1455 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed7g0687 Aed-Chr7 5085837 5092814 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0687 622 879 Calmodulin-binding Proteins AT2G36910 29.391 8.45e-24 107
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0687 K05666 - gmx:100787314 2657.86
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0687 7 5085837 5092814 Aed7g0687 7 5085837 5092814 ECH
Aed7g0687 7 5085837 5092814 Aed1g2332 1 19331245 19339552 PCT