Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0605 ATGTGGTGGCCGTTTAGTAGCAGAGAAGAGGGTTCAGCATTTTCATCTTCTTCCACTGCCGAGGAAGTTACTGAAGGGATCGATGCCACTTTCCTCACTGCTATTGTTACAGGAGCATCTGGTGGTATTGGTGCTGAGACTACCCGTGTTCTTGCTATGCGTGGTGTCCATGTAATTATGGGAGTGAGAAATATGATTGCTGCAAAAGATATAAAAGAAGCAATACTTAAAGAGATTCCCACAGCTAAAGTTGATGCCATGGAGTTAGACCTTAGTTCAATGGCATCTGTTCGGAAATTTGCATCAGAGTTCATTTCATCTGGTCTTCCATTAAACATTCTCATAAACAATGCAGGAGTTTTTGCAACCCCTTTCATGCTGTCTGAAGACAACATTGAACTACAATTTGCCACAAATCATATGGGTCATTTTCTCTTAACAAATCTGTTATTGGATGTTATGAAGAAAACAACACATGAAAGAAAGAAACAAGGAAGAATTGTTAATGTCTCCTCACAGGGTCATCAATTCACCTATCCAGAAGGAATTCTTTTTGAAAAAATTAATGATCAATTAAGTTATAAGAAATTACGTGCCTATGGACAATCAAAGCTTGCTAACATTTTACACGCGAATGAACTTGCAAGACGTCTTAAGGAAGGTGGGGTAGATATTACTGCTAATTCTCTTCATCCAGGAGCTATTGCCACCAATATTCATCGTTACAACAGTGTATTGATTGGACTTCCAGGGGTAGTTAAGAAGTTGTTGAGTTATGCAATTAAAAATGTCCAGCAGGGAGCAGCAACAACATGTTATGTAGCATTGCACCCACAAGTGAGTGGAATCACTGGTGAGTATTTTGCAGATAGTAATCTCTCGGAAGCACACTCCCAGGGAAGAGACATTGATTTGGCTGAGAAACTCTGGGACTTCAGCATGAATTTGATCAAGTAG 957 0.3971 MWWPFSSREEGSAFSSSSTAEEVTEGIDATFLTAIVTGASGGIGAETTRVLAMRGVHVIMGVRNMIAAKDIKEAILKEIPTAKVDAMELDLSSMASVRKFASEFISSGLPLNILINNAGVFATPFMLSEDNIELQFATNHMGHFLLTNLLLDVMKKTTHERKKQGRIVNVSSQGHQFTYPEGILFEKINDQLSYKKLRAYGQSKLANILHANELARRLKEGGVDITANSLHPGAIATNIHRYNSVLIGLPGVVKKLLSYAIKNVQQGAATTCYVALHPQVSGITGEYFADSNLSEAHSQGRDIDLAEKLWDFSMNLIK 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0605 318 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 3 318 - -
Aed7g0605 318 Gene3D - 28 318 - -
Aed7g0605 318 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 33 294 IPR036291 -
Aed7g0605 318 PANTHER RETINOL DEHYDROGENASE 3 318 - -
Aed7g0605 318 Pfam short chain dehydrogenase 33 181 IPR002347 -
Aed7g0605 318 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 173 IPR002347 -
Aed7g0605 318 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 109 120 IPR002347 -
Aed7g0605 318 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 200 219 IPR002347 -
Aed7g0605 318 CDD retinol-DH_like_SDR_c_like 33 310 - -
Aed7g0605 318 PRINTS Glucose/ribitol dehydrogenase family signature 223 240 IPR002347 -
Aed7g0605 318 PRINTS Glucose/ribitol dehydrogenase family signature 200 219 IPR002347 -
Aed7g0605 318 PRINTS Glucose/ribitol dehydrogenase family signature 33 50 IPR002347 -
Aed7g0605 318 PRINTS Glucose/ribitol dehydrogenase family signature 109 120 IPR002347 -
Aed7g0605 318 PRINTS Glucose/ribitol dehydrogenase family signature 159 175 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0605 Aed-Chr7 4474531 4479100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0605 35 172 Acyl Lipid Metabolism Gene Families AT1G63380 30.612 8.95e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0605 - - gmx:100793843 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0605 7 4474531 4479100 Aed7g0605 7 4474531 4479100 ECH