Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0592 ATGGGAACATCAGTGCAGGTAACTCCACTGTGTGGAGTGTACAATGAGAACCCTCTCTCGTATTTGGTCTCTATTGATGGCTTCAACTTCCTCGTCGACTGTGGCTGGAACGACCACTTTGACCCTTCCCTCCTTCAACCCCTCTCCAGGGTAGCATCAACTATAGATGCTGTTTTGCTTTCACATGCGGATACACTTCACCTTGGTGCCCTCCCATATGCCATGAAGCAGCTTGGACTCTCTGCCCCGGTTTACTCAACTGAGCCTGTCTACAGATTGGGCCTTCTCACTATGTATGACCAGTACCTCTCAAGAAAGCAAGTGTCAGAGTTCGATCTGTTCACACTGGATGATATTGATTCCGCTTTCCAGAGTGTAACGAGGCTGACATATTCTCAGAATCATCATTTCTCAGGCAAGGGAGAAGGAATTGTGATAGCACCTCATGTTGCTGGACATCTTTTAGGAGGTACTGTTTGGAAAATTACAAAGGATGGTGAGGATGTCATATATGCTGTTGATTTTAATCATAGGAAAGAAAGGCATTTGAATGGAACTGCTCTAGGTTCTTTTGTGCGGCCAGCTGTTTTAATAACTGATGCTTACAATGCTTTGAACAATCAGCCTTACAGACGTCAAAAGGACAAAGAATTTGGCGATGTCTTAAAGAAGACTCTAAGGGCAGGTGGCAATGTATTACTACCTGTTGACACTGCTGGACGAGTGTTGGAACTTATTCTGATGTTGGAATCGTATTGGTCTGATGAAAACTTGAACTACCCTATATACTTTCTTACATATGTTGCATCCAGCACAATTGATTATGTGAAGAGTTTCCTTGAGTGGATGAGTGATTCCATAGCAAAGTCTTTTGAAAAAACTCGTGAAAATATATTTCTTTTGAAGTATGTCTCTCTTCTGATTAACAAGACTGAGCTCGACAATGCTCCAGATGGTCCAAAGGTTGTTCTAGCATCCATGGCAAGTTTGGAAGCAGGCTTTTCTCATGATATATTTGTTGAGTGGGCCAATGATGTAAAAAATCTTGTACTTTTTACTGAAAGAGGCCAGTTTGCCACACTAGCTCGAATGCTTCAAGCTGATCCACCTCCAAAAGCTGTCAAAGTCATTGTGTCCAAGCGTGTGCCTTTGGTTGGGGAAGAGCTAATTGCCTATGAAGAAGAGCAAAATCGAATAAAAAAAGAAGCTTTAAAAGCCAGTCTTATGAAAGAGGAAGAAATGAAAACATCTCATGGGTCTGATAATAATACTAGTGATCCAATGGTCATTGATTCTGGCAATAATCTTGTACCACCAGAAGTGGCTGGTCCACGAGGTGGAGGATTCCGGGACATATTTATTGATGGATTTGTTCCCCCTTCGACGAGTGTTGCTCCAATGTTTCCCTGTTATGAGAATACATTAGAGTGGGATGATTTTGGTGAGGTCATAAATCCAGACGATTATGTAATTAAGGATGAAGACATGGACCAGACAGCAACACATGGAGGTGATATAAATGGAAAATTAGATGAAGGTGCTGCAAGTTTGATGCTTGATACAAAGCCATCAAAAGTCGTATCTGATGAAAGGACTGTGCAAGTCAGGTGTTCATTGGTTTACATGGATTTTGAAGGACGTTCAGATGGAAGATCCATTAAAAATATTCTATCGCATGTGGCTCCCTTGAAGCTGGTTTTGGTGCATGGGTCAGCCGAAGCTACAGAGCATCTGAAGCAGAACTGCCTGAAGCATGTTTGTCCACATGTTTATGCTCCCCAAATTGAAGAGACAATTGATGTTACCTCTGATTTATGTGCTTATAAGGTTCAACTATCTGAGAAGCTAATGAGTAATGTACTCTTCAAAAAGCTAGGAGATTATGAAATAGCTTGGGTTGATGCTGTAGTAGGGAAGACAGAAAATGACACACTTTCGCTGCTCCCTGCTTCTGGAGCAGCTCCTCCGCATAAATCTGTCCTTGTTGGTGATTTGAAATTGGCAGATATCAAACAGTTTCTCTCCAGCAAAGGTGTTCAGGTGGAATTTGCTGGTGGGGCTTTGCGTTGTGGTGAATACGTAACTCTTCGGAAAGTTGGGGATGCAAGTCAGAAGGCAAGTGCTTCTTCTGAACATTTGTTAGGTGGTGGTTCTGGTGCTCAGCAAATTGTTATTGAGGGTCCTCTGTGTGAAGATTACTATAAAATTCGTGACTATCTCTATTCACAGTTTTATTTGCTTTAG 2244 0.4202 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLVDCGWNDHFDPSLLQPLSRVASTIDAVLLSHADTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVSEFDLFTLDDIDSAFQSVTRLTYSQNHHFSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKERHLNGTALGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDVLKKTLRAGGNVLLPVDTAGRVLELILMLESYWSDENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENIFLLKYVSLLINKTELDNAPDGPKVVLASMASLEAGFSHDIFVEWANDVKNLVLFTERGQFATLARMLQADPPPKAVKVIVSKRVPLVGEELIAYEEEQNRIKKEALKASLMKEEEMKTSHGSDNNTSDPMVIDSGNNLVPPEVAGPRGGGFRDIFIDGFVPPSTSVAPMFPCYENTLEWDDFGEVINPDDYVIKDEDMDQTATHGGDINGKLDEGAASLMLDTKPSKVVSDERTVQVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLVHGSAEATEHLKQNCLKHVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAVVGKTENDTLSLLPASGAAPPHKSVLVGDLKLADIKQFLSSKGVQVEFAGGALRCGEYVTLRKVGDASQKASASSEHLLGGGSGAQQIVIEGPLCEDYYKIRDYLYSQFYLL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0592 747 Pfam Beta-Casp domain 242 365 IPR022712 -
Aed7g0592 747 SUPERFAMILY Metallo-hydrolase/oxidoreductase 5 601 IPR036866 -
Aed7g0592 747 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 532 582 IPR011108 -
Aed7g0592 747 SMART Lactamase_B_5a 17 230 IPR001279 -
Aed7g0592 747 Pfam Metallo-beta-lactamase superfamily domain 22 189 IPR001279 -
Aed7g0592 747 SMART Beta_Casp_2 242 365 IPR022712 -
Aed7g0592 747 Pfam Cleavage and polyadenylation factor 2 C-terminal 641 744 IPR025069 -
Aed7g0592 747 Coils Coil 392 412 - -
Aed7g0592 747 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 1 746 IPR027075 GO:0005847|GO:0006378|GO:0006379
Aed7g0592 747 Gene3D - 7 259 IPR036866 -
Aed7g0592 747 Coils Coil 747 747 - -
Aed7g0592 747 CDD CPSF2-like_MBL-fold 8 203 IPR035639 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0592 K14402 - gmx:100777002 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0592 7 4362989 4370481 Aed7g0592 7 4362989 4370481 ECH