Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0544 ATGCGAGTCTTCGCTTCTCGTACCTCCAATTTCTTAAAGCTCAATCTCGATTATTTCCCACCGATTCACAACCCCTTCAGAGAATTCTCGCAATCCACCGCAATCCCCAAAAAGCAACTCAGAGTTCGCGACCACGGCTACGACAACTACATGGAAGTCGAGAAGAAAACGCGAAAGGTCCTCAAATTCCAGAGCATCATCCTCTCCGAGCCATCCCAATCGCTCCCAATCTCGCGCCTCGAAACCCTCGCGCGGCGCTTTGGCTTCACGCGTAACGAGGCCGGCGCGTTCGTCCTCAAGTTCCCGCACGTGTTCGAAATCTTTGAGCACCCCGTCCAGCGCATCCTCTTCTGCCGCCTCACCCGCAAGGCCATCCTCCAGATAGATCAGGAGCGCCGCGCGCTCGCGGCGGAGCACCCACGCGCCGTCACGCGTCTCCGGAAGCTCCTCATGATGACGAACGAAGGCCGGCTCCGCCTTGAGCACGTGCGCATTGCACGCGCCGCGTATGGGCTCCCTGACGACTTCGAAAACTCGGTGGTTCTGAGGTACCCTCAGTTTTTCCGTTTGATTGATGCCAGGGAAACTAGGAACAAGTACATTGAGGTTGTGGAGAGAAACCCTAGGTTAGGGACTTGTGCAATTGAGGATGTTAGGGAAAGGGTTTATAGAGAGAGAGGTGATGATGCTGAGGATGTTAGGTTTTCTTTTGTGATTGATTTTCCACCTGGTTTTAAGATTGGTAAGTATTTTAGGATTGCAATGTGGAAGTGGCAGAGGCTTCCTTATTGGTCCCCTTATGAGGATGTTTGTGGGTATGATTTGAGGTCCATTGAGGCCCAGAAGAGGATGGAGAAGAGGGCTGTTGCCACCATTCACGAGTTGTTGTCGTTGACTGTGGAGAAGAAGATTACGTTGGAGCGGATTGCCCATTTTCGAATGGCGATGAACCTGCCCAAGAAGCTGAAGGATTTTTTGCTGCAGCACCAGGGGATATTTTATGTCTCCACCAGGGGGAATCAGGGGAAGCTGCACACTGTTTTCCTTAGGGAGGCGTATAGGAAGGGCGAGCTGATCGAGCCAAATGAGTTGTATTTGGCACGGAGGAAGCTGGCTGAGCTCGTCCTGTTGAGCCCCCGGAAGGCTAAGGTTGATGGGGAGTTGGTTGGGTACAGGAGAAGCAGATTAGAAGATGAAATGGGGCAGGTAACGAGGGCATATGTGGAGGATGCTTGTGAAGACTTTAAGGGCGAAGATGATTCGAGGCTGGATAAGGATGCTGAGGATGATTTGACATCAGATATAGGTTCTGATATTGATTTGGGAGATGAGGATGATGATTGTGTGGATACTGTGTCATTGCAGAGGACATCTTAG 1377 0.5149 MRVFASRTSNFLKLNLDYFPPIHNPFREFSQSTAIPKKQLRVRDHGYDNYMEVEKKTRKVLKFQSIILSEPSQSLPISRLETLARRFGFTRNEAGAFVLKFPHVFEIFEHPVQRILFCRLTRKAILQIDQERRALAAEHPRAVTRLRKLLMMTNEGRLRLEHVRIARAAYGLPDDFENSVVLRYPQFFRLIDARETRNKYIEVVERNPRLGTCAIEDVRERVYRERGDDAEDVRFSFVIDFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVCGYDLRSIEAQKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKKLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNELYLARRKLAELVLLSPRKAKVDGELVGYRRSRLEDEMGQVTRAYVEDACEDFKGEDDSRLDKDAEDDLTSDIGSDIDLGDEDDDCVDTVSLQRTS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0544 458 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 26 438 IPR040295 -
Aed7g0544 458 MobiDBLite consensus disorder prediction 417 432 - -
Aed7g0544 458 MobiDBLite consensus disorder prediction 433 448 - -
Aed7g0544 458 Pfam Plant organelle RNA recognition domain 42 378 IPR021099 GO:0003723
Aed7g0544 458 MobiDBLite consensus disorder prediction 417 458 - -
Aed7g0544 458 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 26 438 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0544 Aed-Chr7 4002929 4004305 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0544 - - gmx:100782167 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0544 7 4002929 4004305 Aed7g0544 7 4002929 4004305 ECH