Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0490 ATGGGGTGGTACAGAAGGGGAAAGCTTGCACTTGATCATTTTCGCAGCTTGGCCTCAAGGTTTACGCCTCAAAATCCAAATTTTCAGCGTAGTTCGAGGATTTGCTCATCTGGGTATTTGGATTCAGGTTCAAAAGGAGCTAGCTTCAATGGGTTCTCTTCGTTTTGTTCAATTTCTCAGAGATTAGGCACACGGGGTGTTGTTGGGGTTAACAGGAACTTTCACAATCCGTTTCTTCTTGGGGCTAAGAGATTTTACTATGTTGATCCTCGCAATGTGCAGCATTTCAAGCCAAGAGGGCCATGGCGTTGGTTTCAGAATCCTAGACATGTTTTCATTGTTGTGATGGTTGGTTCAGGGGTTTTAATCACTGTGTATTTTGGGAACATAGAAACAGTTCCTTACACCAAGCGAACCCATTTGATTCTGTTGTCGAAAGCCATGGAGAGGAAGCTTGGGGAGAGCCAGTTTGAACAAATGAAGGCAGGTTTTAAGGGGAAGATATTGCCTCCTATACATCCTGAGAGTGTGAGGGTGACAATGATTGCTAAGAATATAATTGATGCATTGCAGAGAGGGTTGATGAAGGAGGAGCAGGTGTGGAGTGATTTGGGGTATGCATCGGAGCACACAATGCTGGTTGAAGGGGATGGAAAGGAGACATTAAATGCATTGGATGGGAGTGAAGAGAAGATTGAAGGGAATTGGGCCAAGGAGGATGAGATTCTTGATGATAAATGGATTCAGAAAAGCCGGAAAAAGGGTCAGGAACGAGGCTCACTGGCTGCAACATCACATTTGGATGGGTTAAATTGGGAGATTTTGGTGGTAAATGAGCCTGTTGTTAATGCCTTCTGCTTACCTGGTGGGAAGATAGTTGTGTTCACTGGTTTGTTAGAGCATTTTAAAAGTGATGCAGAGATAGCAACTATTATTGGACATGAGGTTGGGCATGCTGTTGCAAGACATAGTGCCGAGGGGATTACAAAGAACCTGTGGTTTGCTATTCTACAGTTGATACTTTATCAATTTGTCACACCTGATATTGTCCACACAATGTCATCCCTTTTCTTGCGCCTACCTTTCTCCAGGCGGATGGAAATAGAAGCTGATTACATTGGGCTGCTGTTAATTGCATCAGCTGGCTATGATCCCCGGGTAGCACCCAAAGTGTATGAGAAACTGGGAAAAATCACTGGTGATTCCACCCTTAGGGATTATCTCTCTACTCATCCTTCTGGAAAAAAAGAGCAGAATTATTGGCCCAAGCTAAGATAA 1278 0.439 MGWYRRGKLALDHFRSLASRFTPQNPNFQRSSRICSSGYLDSGSKGASFNGFSSFCSISQRLGTRGVVGVNRNFHNPFLLGAKRFYYVDPRNVQHFKPRGPWRWFQNPRHVFIVVMVGSGVLITVYFGNIETVPYTKRTHLILLSKAMERKLGESQFEQMKAGFKGKILPPIHPESVRVTMIAKNIIDALQRGLMKEEQVWSDLGYASEHTMLVEGDGKETLNALDGSEEKIEGNWAKEDEILDDKWIQKSRKKGQERGSLAATSHLDGLNWEILVVNEPVVNAFCLPGGKIVVFTGLLEHFKSDAEIATIIGHEVGHAVARHSAEGITKNLWFAILQLILYQFVTPDIVHTMSSLFLRLPFSRRMEIEADYIGLLLIASAGYDPRVAPKVYEKLGKITGDSTLRDYLSTHPSGKKEQNYWPKLR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0490 425 Pfam Peptidase family M48 260 414 IPR001915 GO:0004222|GO:0006508
Aed7g0490 425 CDD M48C_Oma1_like 268 416 - -
Aed7g0490 425 PANTHER METALLOENDOPEPTIDASE OMA1 83 416 - -
Aed7g0490 425 Gene3D Metalloproteases ("zincins"), catalytic domain 256 327 - -
Aed7g0490 425 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 83 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0490 Aed-Chr7 3506002 3509788 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0490 K23010 - gmx:100799127 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0490 7 3506002 3509788 Aed7g0490 7 3506002 3509788 ECH