Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0376 ATGTCGCCGTCAAACGGGTTGCAGAACGGCGGCGGCGGAGGCGGTGGTGGTAATGGGGTCAGTTATATAGAGCATCAGGTTTCAAAACTTGACACTCTTGCTGGTGTGGCAATCAAGTATGGTGTTGAGGTAGCTGACATCAAAAGGATGAATGGGTTAGCCACAGATCTTCAAATGTTTGCATTGAAGACATTGAAAATTCCATTACCAGGACGTCATCCACCATCTCCTGCTCCTGGTCCACATGATGAACCTGCCAAGTCAGGAGATGCTAGCGTTGAGAGGAAACCCCTGCGCATAGGTCAATCTGCCATGAAGGAACCTCTCCAGTCCTTAAGACCAAAACCACCTCAACCGAATATTTCTCCAGCTATGAGCATTTTACAAAAATTCTATGGCCTCAAATCTTCAAATTCAAGAGATACATTGAATGGAACAGAAATGGCAGTTTATACATCCGTGAGTTCTGATCAATCCAGAGGGGAATGGCTTCCCAATGCCTCGCCATCATTATCAAATGATTACCCTAAGTCAACAAGTTTAGTTTATGATCTGCTGACCGGGGATGGTGAATATGTGCCTCTTGCGGAAATTGGGGACGGGGGAGTTGAGAAGTCTGATGAGAAATCTGTCCGAAGACGTCAGAAAGCTGAAGTTGATAACGGAGCCAGTACCCCAGAAAAGATTATGAAAGAAGGAAATGGTAATGGATCAAATGGTTTTTCTTCAACTGAAAGAAGGAAATCGGCTAGTCGAGCAGCACTGTTTCCTGAGTCAGAATCAGGATGGTTAGATTCAATTCCAGTGGGGTTGGGAGAATCTATATTTACTGACAGCTTTTCCGGAGTGCGCAAATCGTCGAGTGCATCAAGCCTCAGAGAGCAGGAAAAGAACAATTCAACAACAGGCTGGCCACCTGCAATATGGGGCTTGAAACCTGACCTGCAAGCAGCCATTTCGAAACCTATCTTTGATGGTTTACCTATCCCAATAACCGGCCGCAGAAGCAAAACTGCCCTTGATTAG 1026 0.4571 MSPSNGLQNGGGGGGGGNGVSYIEHQVSKLDTLAGVAIKYGVEVADIKRMNGLATDLQMFALKTLKIPLPGRHPPSPAPGPHDEPAKSGDASVERKPLRIGQSAMKEPLQSLRPKPPQPNISPAMSILQKFYGLKSSNSRDTLNGTEMAVYTSVSSDQSRGEWLPNASPSLSNDYPKSTSLVYDLLTGDGEYVPLAEIGDGGVEKSDEKSVRRRQKAEVDNGASTPEKIMKEGNGNGSNGFSSTERRKSASRAALFPESESGWLDSIPVGLGESIFTDSFSGVRKSSSASSLREQEKNNSTTGWPPAIWGLKPDLQAAISKPIFDGLPIPITGRRSKTALD 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0376 341 MobiDBLite consensus disorder prediction 101 120 - -
Aed7g0376 341 MobiDBLite consensus disorder prediction 286 305 - -
Aed7g0376 341 Gene3D LysM domain 18 74 IPR036779 -
Aed7g0376 341 MobiDBLite consensus disorder prediction 195 254 - -
Aed7g0376 341 PANTHER LOC443603 PROTEIN-RELATED 3 341 IPR045030 -
Aed7g0376 341 PANTHER OS06G0729900 PROTEIN 3 341 - -
Aed7g0376 341 MobiDBLite consensus disorder prediction 201 221 - -
Aed7g0376 341 ProSiteProfiles LysM domain profile. 23 67 IPR018392 -
Aed7g0376 341 SUPERFAMILY LysM domain 23 68 IPR036779 -
Aed7g0376 341 MobiDBLite consensus disorder prediction 153 176 - -
Aed7g0376 341 SMART LysM_2 24 68 IPR018392 -
Aed7g0376 341 MobiDBLite consensus disorder prediction 68 95 - -
Aed7g0376 341 MobiDBLite consensus disorder prediction 231 249 - -
Aed7g0376 341 CDD LysM 23 67 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0376 Aed-Chr7 2797561 2801439 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0376 - - gmx:100786430 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0376 7 2797561 2801439 Aed7g0376 7 2797561 2801439 ECH