Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed7g0265 | ATGCTCTGTATGCGTTGTACCCCACCCATCATCCAATTTAACCAGATTTTGGATTCAATTGTGAAAATGAAGCAGTTCCCCACTGCTATTTCCCTTTTTAAACAAATGCAACTCAAGGGAATTCAGCCTAAGCTTGTTACTTTGTGCATCCTCATGAACTGCTTCTGCCACTTGGGTCATATCAACTCGGCTTTTTCTGTATTGGCCAACATTCTCAAGAGGGGTTATCAGCCAGATACCTTTACCTTCGGAACACTCATCAAAGGTCTCTGTCTTAAGGGACAGGTCAAAAAAGCACTGCACTTTCACGACAACCTCGTAGCTCAAGGATTCCGGCTGGACCAAGTTGGTTACGGGACCTTGATCAATGGTGTATGTAAGATAGGAGATTCTAGAGCTGCCATCAACTTGCTCAGAAGAATTGATGGCCGATTCACTCAGCCTGATGTGGGAGGAGTAACTCCTAATGTTCGCAGCTACAATATCATGATTAATGGATTTTGTAAGATTAAAATGACGCACGAGGCCATAAATGTCTTTAAAGAAATGCATCAGAGATATGTGGTTCCAGATATAGTGACTTACAATTCTCTTATTGATGATGTCTGTACATACACTGTTATGATCAATGGGCTTTGTAAAGAGGGCCTCCTTGAAGAAGCATTGGCCTTGTTCTCAAAAATGGAAGACAATGGTTGCATCCCTAATCCTGTAACTTTTGAAATAGTTATATGTTCTCTATTTCAAAATAATGAGAATGATAAGGCAGAGAAACTTCTCCGTGAAATGATTGCTAGAGGCCTATTTTTCTGTTCTCTCTTTGCGATTTCTTCTTCTTCTCTCATGGAACTTTACTGTTCCATTGATTCTGCTGATAAGCTTAGGCTTAGACTCTTTCAATCTGAACTGAACACCATGTCATTCACACTTTTCCTGAAGACCCTTTTCCTCTTCTTACCTTGCTACCTGTGCCTCCCTGACTCAGCAACAACAACAACAACAACAACCCTTAAGCCTATTTTGTTAACCCCATCAAAGCCTGCAACAGCAATCCCTGCATTCCCAGAACAATCTGATGTTTCAGGATGCCCTCTTACCCTCTCAGATGAGCTCTTTGATGGGATCAAAAGTGCATGTGGTGGTGCTGACATGGAGCTCCACCACAGCAGGTGCTGTCCAGTGCTTGCAGCATGGTTGTATTCTGCATATTCTGCCACTGCACTAGGCTTGAATGTTCATGGCCATGGCAATGTTCATGGCCATGGCCATGCCATGTCAGCATATGACATGATGCCTCTGTTGCCGGATGACTCAGAAACCTGTGTGAATGAGCTGGGAAAGGCTTTGGAACTGAGGGGGATTCAGCTGGCAAAGCCTAATGAGACTTGTGATGTGGTGTATTGCTTTTGTGGCATTAGGCTGCACCACTTGACCTGCTCTGATTCGTTTTCTGTTGACCAAAATGGAGAACTTGTTGGGGATGCAACTGTGAGAAGGTTGGAGAGGAATTGCTTGAGTAGCAGTACTGATGTCAATGGCTTACCAGGTCTTGGAGGGTGCTCTAAGTGCTTAAATACCCTCCATTTGCTTAACAAAAAGTCTTCAAATACAAGCAAAGTAGAAGACAGGACCACCAAGATCCACAACAAAGATTGTGAGCTTATGGGCTTGACATGGCTTCTGGCTAAAAATAGGACAGCTTATATGCACACAGTTTCCGCGGTTCTCCGTGCTTTGATGTTGAACACTGATGGCTCTTACCCTCAATCCTGCTCTCTAAACAGTGATGGAATGCCTCTTGCTGTGGATTCATCTGAAATCTCTGATCACTCTTCATCAACCAACCTTCAACCACCCATCTCTCTTTCTTTGTTATTACTTTGTTTGTTACTACTCCCTATGCATTTTGCAATGTTATCCTCATAG | 1926 | 0.432 | MLCMRCTPPIIQFNQILDSIVKMKQFPTAISLFKQMQLKGIQPKLVTLCILMNCFCHLGHINSAFSVLANILKRGYQPDTFTFGTLIKGLCLKGQVKKALHFHDNLVAQGFRLDQVGYGTLINGVCKIGDSRAAINLLRRIDGRFTQPDVGGVTPNVRSYNIMINGFCKIKMTHEAINVFKEMHQRYVVPDIVTYNSLIDDVCTYTVMINGLCKEGLLEEALALFSKMEDNGCIPNPVTFEIVICSLFQNNENDKAEKLLREMIARGLFFCSLFAISSSSLMELYCSIDSADKLRLRLFQSELNTMSFTLFLKTLFLFLPCYLCLPDSATTTTTTTLKPILLTPSKPATAIPAFPEQSDVSGCPLTLSDELFDGIKSACGGADMELHHSRCCPVLAAWLYSAYSATALGLNVHGHGNVHGHGHAMSAYDMMPLLPDDSETCVNELGKALELRGIQLAKPNETCDVVYCFCGIRLHHLTCSDSFSVDQNGELVGDATVRRLERNCLSSSTDVNGLPGLGGCSKCLNTLHLLNKKSSNTSKVEDRTTKIHNKDCELMGLTWLLAKNRTAYMHTVSAVLRALMLNTDGSYPQSCSLNSDGMPLAVDSSEISDHSSSTNLQPPISLSLLLLCLLLLPMHFAMLSS | 641 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed7g0265 | 641 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 9 | 43 | IPR002885 | - | |
| Aed7g0265 | 641 | Pfam | PPR repeat | 118 | 141 | IPR002885 | - | |
| Aed7g0265 | 641 | Pfam | PPR repeat | 13 | 41 | IPR002885 | - | |
| Aed7g0265 | 641 | Gene3D | Tetratricopeptide repeat domain | 148 | 201 | IPR011990 | GO:0005515 | |
| Aed7g0265 | 641 | Pfam | PPR repeat | 152 | 183 | IPR002885 | - | |
| Aed7g0265 | 641 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 156 | 190 | IPR002885 | - | |
| Aed7g0265 | 641 | PANTHER | GPI-ANCHORED PROTEIN | 307 | 629 | IPR040376 | - | |
| Aed7g0265 | 641 | PANTHER | PROTEIN, PUTATIVE-RELATED | 307 | 629 | - | - | |
| Aed7g0265 | 641 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 79 | 113 | IPR002885 | - | |
| Aed7g0265 | 641 | Gene3D | Tetratricopeptide repeat domain | 1 | 147 | IPR011990 | GO:0005515 | |
| Aed7g0265 | 641 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 201 | 235 | IPR002885 | - | |
| Aed7g0265 | 641 | Gene3D | Tetratricopeptide repeat domain | 202 | 301 | IPR011990 | GO:0005515 | |
| Aed7g0265 | 641 | TIGRFAM | PPR: pentatricopeptide repeat domain | 203 | 236 | IPR002885 | - | |
| Aed7g0265 | 641 | TIGRFAM | PPR: pentatricopeptide repeat domain | 13 | 43 | IPR002885 | - | |
| Aed7g0265 | 641 | TIGRFAM | PPR: pentatricopeptide repeat domain | 46 | 80 | IPR002885 | - | |
| Aed7g0265 | 641 | TIGRFAM | PPR: pentatricopeptide repeat domain | 81 | 114 | IPR002885 | - | |
| Aed7g0265 | 641 | TIGRFAM | PPR: pentatricopeptide repeat domain | 159 | 191 | IPR002885 | - | |
| Aed7g0265 | 641 | TIGRFAM | PPR: pentatricopeptide repeat domain | 238 | 268 | IPR002885 | - | |
| Aed7g0265 | 641 | Pfam | PPR repeat family | 201 | 247 | IPR002885 | - | |
| Aed7g0265 | 641 | Pfam | PPR repeat family | 46 | 91 | IPR002885 | - | |
| Aed7g0265 | 641 | Pfam | SPARK | 361 | 537 | IPR043891 | - | |
| Aed7g0265 | 641 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 236 | 270 | IPR002885 | - | |
| Aed7g0265 | 641 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 44 | 78 | IPR002885 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed7g0265 | Aed-Chr7 | 1867635 | 1875539 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed7g0265 | 10 | 293 | Glycosyltransferase | AT1G05670 | 28.479 | 1.15e-35 | 141 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed7g0265 | - | - | gmx:100814208 | 552.747 |
Event-related genes