Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0254 ATGGGGATCCCTGGATTGGGCAATCAGAATAATGGGCAGCAAAGATTAGGCATAACTGAGCCCATTTCATTGGCTGGACCAACCGAGGATGATGTGATCAAGACGTGTGAACTTGAGAAGTACTTACAAGGTGTTGGATTGTATGAGAGTCAGGAGGAGGCTGTGGGAAGGGAGGAAGTGCTTGGCAGGCTGGACCAGGTTGAACTTATTGTGAAGATTTGGGTTAAGAACATCAGCCGGGCAAAGGGGTTCAATGAACAACTCGTGCATGAAGCAAATGCCAAGATTTTCACCTTTGGCTCTTATCGGTTAGGGGTGCATGGCCCTGGAGCTGATATAGATACTCTTTGTGTGGGACCTAGACATGCAACAAGAGATGAGGATTTCTTTGGTGAGCTACAGAAGATGCTATCTGAGATGCAAGAAGTAACAGAATTGCACCCTGTGCCTGATGCTCATGTCCCTGTTATGAAATTCAAGTTTAATGGAATTTCTGTTGATCTCCTGTATGCAAGATTAGCTTTGTGGGTTATTCCTGACGATTTAGATATATCACAGGAATCAATATTACAAAATGTTGATGAACAAACTGTTCTTAGTCTTAATGGTTGTAGAGTAACTGATCAGGTCCTGCGATTGGTTCCAAATATTCAGACCTTTCGCACAACATTGAGATGCATGAGGTTTTGGGCAAAGCGTCGTGGTGTTTATTCAAATGTTGCAGGTTTTCTTGGTGGTATAAACCTGGCATTGCTTGTTGCTCGAATATGCCAGTTATATCCTAATGCACTTCCTAATATGTTAGTGTCTCGATTCTTTAGGGTATATACTCAATGGCGATGGCCAAATCCAGTCATGCTATGTGCTATTGAAGAAGGATCTCTTGGACTAGCAATTTGGGATCCTAGAAGAAATCCTAAGGATAGATATCATCTAATGCCTATAATTACTCCTGCTTATCCTTGCATGAACTCCACTTACAATGTGACATCAAGTACATTGCGTGTTATGTCAGACGAGTTTCGGAGGGGAAGTGAAATATGTGAGGCTATGGAGGCTACCAAGGCAGATTGGGATACCCTTTTTGAGCCTTATCCCTTTTTTGAATCTTACAAGAATTATCTACAGATAGACATAACAGCAGAAAATGCCGATGACCTTAGACAATGGAAAGGCTGGGTTGAGTCTCGTCTCCGCCAGTTGACATTGAAGATTGAGAGGCACACTTATGGTATGCTTCAATGTCATCCACATCCTGGTGAATTCTCAGACAAATCTAGACAATTTCACCACTGTTACTTTATGGGTCTGCAGCGTAAGCAAGGAGTTCCAGTGAATGAAGGTGAACAGTTTGATATAAGGCTAACTGTTGAAGAATTTAAGCATTCTGTCAATGCTTACACTCTATGGAAACATGGAATGGATATCCATGTGTCCCATGTGAAACGCCGTAACATTCCTAACTACATATTCCCTGGTGGTGTCCGACCTACCTGCCCATCAAGAGTAACTGCCGAGAATAAACAAAGTTCCAAATCAAGGGTTTCTGGTCATGGTCAAGCAGAAAAGCCTCAAGGAGGTAAAGCAGTTGCAGTTGCAGTTGCAGCAGATGATGTGAGGAAGAGAAAGAGATTAGAGGACAACATGGATAATAACCCAAGGAATTCCAAGTCCCCTGTATCTTTACCTCCCCCCAGCAGGGAAGTTCATGAAGATATAACTCCTATTAGTGTTTCAAGTTCTTGTTCTATGAAATTTGATGAATCAGAAGTCAATAGTATTAGTGGACAAAAGAGCGAGAAACTTTGTCTGAAATCTCCTGGGGAGATTCCTTCTGTGGATAGTGGGACCAATGGATCAGTTACAAGCAACCAACAAGTGAATCCTCTACTTGCAGCTACTGATACATCTAATTCTAAAGAAGAAGAAAAGCTAGCCATTGATAAGATTATGACTGGTCCGTACGATGCACATCAAGCCTTTCCAGAAGAACCTGAAGAGCTTGAAGATGATACTCCGTATGGAAATCAGGTCAAAGATTCTGGTGGGAACATGAAAAACAACATGGAATCTTTAGGCTCAAATCCTGCTGTGGCAGAAGAGCCAGTTATTTTGCAGGAAATTACTGGTTCAACTTATTTATGCTCCAATGAGAGCTTGGAGGAGCTTGAGTATGAAGAAATTGATGTGGCTCTGTTTATTCTTTCTTTTTACCCCCCTCCCTCCCCCCCTTGTCTCTCTTCCTTTTGGCAAAAGCCTGCTGAGCTAACAGGACCATTGTTATGTGGGCCTCCTGCACCTGTACCAATGAAGAAGCCGCTTATCAGGTTGAACTTCACCTCCTTAGGCAAAGCTGCTGACAAAAGTTCTTGA 2373 0.4256 MGIPGLGNQNNGQQRLGITEPISLAGPTEDDVIKTCELEKYLQGVGLYESQEEAVGREEVLGRLDQVELIVKIWVKNISRAKGFNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELQKMLSEMQEVTELHPVPDAHVPVMKFKFNGISVDLLYARLALWVIPDDLDISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLAIWDPRRNPKDRYHLMPIITPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEATKADWDTLFEPYPFFESYKNYLQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDKSRQFHHCYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKHGMDIHVSHVKRRNIPNYIFPGGVRPTCPSRVTAENKQSSKSRVSGHGQAEKPQGGKAVAVAVAADDVRKRKRLEDNMDNNPRNSKSPVSLPPPSREVHEDITPISVSSSCSMKFDESEVNSISGQKSEKLCLKSPGEIPSVDSGTNGSVTSNQQVNPLLAATDTSNSKEEEKLAIDKIMTGPYDAHQAFPEEPEELEDDTPYGNQVKDSGGNMKNNMESLGSNPAVAEEPVILQEITGSTYLCSNESLEELEYEEIDVALFILSFYPPPSPPCLSSFWQKPAELTGPLLCGPPAPVPMKKPLIRLNFTSLGKAADKSS 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0254 790 MobiDBLite consensus disorder prediction 592 626 - -
Aed7g0254 790 Gene3D - 17 362 - -
Aed7g0254 790 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 719 - -
Aed7g0254 790 MobiDBLite consensus disorder prediction 502 518 - -
Aed7g0254 790 CDD NT_PAP_TUTase 57 214 - -
Aed7g0254 790 MobiDBLite consensus disorder prediction 677 691 - -
Aed7g0254 790 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 365 491 IPR011068 GO:0003723|GO:0016779|GO:0031123
Aed7g0254 790 PANTHER POLY A POLYMERASE 1 719 - -
Aed7g0254 790 SUPERFAMILY Nucleotidyltransferase 17 213 IPR043519 -
Aed7g0254 790 Pfam Nucleotidyltransferase domain 80 173 IPR002934 GO:0016779
Aed7g0254 790 Pfam Poly(A) polymerase predicted RNA binding domain 367 426 IPR007010 GO:0003723|GO:0043631
Aed7g0254 790 Gene3D Poly(A) polymerase predicted RNA binding domain 366 481 - -
Aed7g0254 790 MobiDBLite consensus disorder prediction 611 626 - -
Aed7g0254 790 MobiDBLite consensus disorder prediction 497 570 - -
Aed7g0254 790 SUPERFAMILY PAP/OAS1 substrate-binding domain 215 364 - -
Aed7g0254 790 MobiDBLite consensus disorder prediction 664 691 - -
Aed7g0254 790 Pfam Poly(A) polymerase central domain 17 364 IPR007012 GO:0004652|GO:0043631
Aed7g0254 790 Gene3D Beta Polymerase, domain 2 49 208 IPR043519 -
Aed7g0254 790 MobiDBLite consensus disorder prediction 535 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0254 Aed-Chr7 1793492 1800312 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0254 K14376 - gmx:100816915 1386.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0254 7 1793492 1800312 Aed7g0254 7 1793492 1800312 ECH