Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0186 ATGGCGATGGTGGACCAGCCTCTGTATCCGATTGCCGTTTTGATCGACGAGTTGAAGAACGAGGACATTCAGCTGCGCCTGAACTCGATCCGAAGGCTCTCCACGATTGCGCGCGCCCTCGGCGAGGATCGCACGCGGAAGGAGCTGATTCCATTCCTCAGCGAGAACAACGACGATGACGACGAAGTGCTCCTCGCAATGGCCGAGGAATTAGGCGTCTTCATTCCCTACGTCGGAGGCGTGGAGCACGCCAACGTGCTTCTTCCTCCCTTGGAGACTCTCTGCACCGTTGAGGAAACCTGCGTCAGAGACAAATCGGTGGAGTCGCTGTGTAGAATTGGAGCTCAGATGAGAGAGCAAGATTTGTGGTTCACGGCACGTGTTTCATCGTGCGGGTTGTTCCATATTGCCTACCCTAGTGCACCAGAGGCGGTGAAGACTGAACTGAGAGCCATATATGGTCAGCTGTGTCAAGATGATATGCCCATGGTTAGGAGATCTGCTGCCACAAACTTGGGAAAGTTTGCTGCTACTGTTGAAGCTCCTCACTTGAAAGCTGACATCATGTCTGTGTTTGAGGATCTCACACAGGATGATCAAGATTCTGTTCGGCTACTTGCTGTTGAGGGTTGTGCAGCTCTGGGAAAATTATTGGAACCTCAAGATTGTGTGGCACATATTCTTCCTGTCATAGTCAATTTTTCTCAGGAGTTGTCAACAGATTCATCTCAGCATGTTCGCTCTGCATTGGCTTCCGTTATAATGGGAATGGCACCGGTGTTAGGGAAGGATGCCACAATTGAGCAACTTCTGCCTATTTTCCTTTCTCTTTTGAAAGATGAGTTTCCTGATGTCAGGCTAAATATTATCAGCAAGCTTGATCAAGTGAACCAGGTTATTGGTATTGATCTGTTATCTCAGTCTCTGTTGCCAGCTATAGTTGAACTTGCTGAGGATCGGCACTGGAGAGTTCGACTTGCAATCATAGAATATATACCCTTATTGGCAAGCCAGTTGGGTGTAGGTTTTTTTGATGATAAGCTTGGAGCTCTTTGCATGCAATGGCTAAAGGACAAGGTATACTCAATCCGTGATGCAGCTGCTAATAACATCAAACGCTTGGCAGAAGAATTTGGACCGGATTGGGCAATGCAGCACATAATTCCCCAGGTTTTGGACATGGTTACTGATCCACATTATCTGTATCGGATGACAATCTTACAAGCAATTTCGCTGCTAGCTCCTGTTCTGGGCACAGAGATTACTTCTTCAAAACTGCTTCCTCTGGTCATTAATGCATCAAAAGATAGGGTACCCAATATCAAATTCAATGTAGCTAAAGTGTTGCAGTCTCTCATCCCAATTGTTGATCAATCTGTTGTTGAGAATACCATCCGTCCCTGTCTGGTTGAGCTCAGTGAAGATCCAGATGTTGATGTTAGGTTTTTTGCCTCTCAAGCACTACAATCTAGTGATCAAGTCAAAATGTCTAGCTAG 1497 0.4663 MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEDRTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCTVEETCVRDKSVESLCRIGAQMREQDLWFTARVSSCGLFHIAYPSAPEAVKTELRAIYGQLCQDDMPMVRRSAATNLGKFAATVEAPHLKADIMSVFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNIKRLAEEFGPDWAMQHIIPQVLDMVTDPHYLYRMTILQAISLLAPVLGTEITSSKLLPLVINASKDRVPNIKFNVAKVLQSLIPIVDQSVVENTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0186 498 SUPERFAMILY ARM repeat 8 490 IPR016024 -
Aed7g0186 498 ProSiteProfiles HEAT repeat profile. 426 464 IPR021133 -
Aed7g0186 498 ProSiteProfiles HEAT repeat profile. 270 308 IPR021133 -
Aed7g0186 498 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 236 498 - -
Aed7g0186 498 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 1 237 - -
Aed7g0186 498 ProSiteProfiles HEAT repeat profile. 149 187 IPR021133 -
Aed7g0186 498 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A 1 237 - -
Aed7g0186 498 ProSiteProfiles HEAT repeat profile. 10 48 IPR021133 -
Aed7g0186 498 Pfam HEAT repeats 272 371 - -
Aed7g0186 498 ProSiteProfiles HEAT repeat profile. 188 226 IPR021133 -
Aed7g0186 498 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A 236 498 - -
Aed7g0186 498 ProSiteProfiles HEAT repeat profile. 465 498 IPR021133 -
Aed7g0186 498 Gene3D - 235 490 IPR011989 -
Aed7g0186 498 Gene3D - 2 234 IPR011989 -
Aed7g0186 498 ProSiteProfiles HEAT repeat profile. 309 347 IPR021133 -
Aed7g0186 498 ProSiteProfiles HEAT repeat profile. 387 425 IPR021133 -
Aed7g0186 498 ProSiteProfiles HEAT repeat profile. 227 269 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0186 Aed-Chr7 1311283 1318059 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0186 K03456 - qsu:112029701 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0186 7 1311283 1318059 Aed7g0186 7 1311283 1318059 ECH