Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0184 ATGGAAGATGATGAATCTCCTCAGATCAAAGGTGTTGTTATAATCTCCCTTCCACCACCAGATAACCCTTCTTTGGGCAAAACCATCACTGCTTTCACTTTCTCTAACCCTTCTCCTCCTCAACCCTCTCTTCAACCCCACCAACAACAGCAAAGTCAACAAGCACACCCCAATGCTCACAACAACACTGATCCTCCACTTCAGTCCTACCCATCAGATCCTCAGCTTAGTTTTTCATTCACAAGACTCTTCCACAGCACCCCTATGAAGATTTTTTCATTCTTTGGAATTCTCCTCTTTGCTCTCTTTCTCTATGGTTTTGTTTCTTCAACCACCACTGTGGAACTACGTGGCCGCAAGAATGATGATGATGACACACCCACTTCATTTTTGTTCCCTTTGTTTCCCAAATTTGGTGTTTTGGGGCAGAAGGATTTGAGGCTCCAACTGGGGAAGCTTGCTCAAAAAGAGAAGTTTTTGACACAGAGAAACGATGGTTTTGGTTCTGGAGTTGTGGCCGTTGACTCTTCATCCGTTTTCCCAGTCAGTGGCAATGTTTATCCAGATGGGTTGTACTTCACTATTTTACGTGTTGGAAATCCTCCAAAGAGTTATTTTCTCGATGTGGATACAGGGAGTGACTTAACTTGGATGCAGTGTGATGCTCCATGCATAAATTGTGGGAAGGGAGCACATGCCCTATACAAGCCAACAAGAGCCAATGTAGTATCATCCGTGGATTCTCTCTGCTTGGATGTTCAGAAAAAACAGAAGAATGGACATCATGATGAAAGTTTGTTACAGTGTGACTATGAAATTCAATATGCAGATCATAGTTCTTCCTTGGGGGTTCTTGTTAGAGATGAGCTTCATCTTGTAACTACTAATGGATCTAAAACCAAGCTAAATTTTGCTTTTGGGTGTGGATATGATCAAGAAGGCTCACTTTTGAACACATTGGCTAAAACAGATGGAATCATGGGGTTGAGTAGGGCAAAAATCAGCCTACCCTACCAGTTAGCAAGTAAAGGGCTTATTAAGAATGTGGTTGGTCATTGCCTAAGCAATGATGGAGCTGGTGGTGGATACATGTTCTTAGGTGATGATTTTGTGCCATATTGGGGTTTGACTTGGGTACCCATGGCCTATACCCTTACTACGGATTTTTACCAAACTGAGATTCTCGGAATAAATTATGGAAATCGCCAACTCAGATTCGATGGCCAAAGCAAAGTAGGAAAGGTGCTTAATGAAGTTTCTGGGTTGGGACTTGTTCAAGATGATTCAGATACTACTTTACCCATTTGCTGGCAAGCAAATTTCCTAATCAGATCTGTCAAAGATGTCAATGATTACTTCAAGACCTTAACTCTTCAGTTTGGAAGCAAGTGGTGGATTTTGTCTAAATTGTTTCAGATACCTCCTGAGGGTTACTTGATCATTAATAACAAAGGCCATGTGTGCTTGGGAATCCTTGACAGTAGTAATGTAAATGATGGAACCACAATTATACTTGGAGGTAGAACTCTCATTCTCAATGAAAACCTGAAACCTTATTCCAATGCAGTATCTGTGAAATTTTTGCATGACATTTCCTTGAGAGGATATTCGGTTGTATATGATAATGTGAAGCAAAAAATTGGTTGGAAGCATGCAGACTGTAGCATGCCAAGCAGAAGATTGAGAAAGAAAAATAATTTCATCCCTGATAGCATGCTATAA 1722 0.4094 MEDDESPQIKGVVIISLPPPDNPSLGKTITAFTFSNPSPPQPSLQPHQQQQSQQAHPNAHNNTDPPLQSYPSDPQLSFSFTRLFHSTPMKIFSFFGILLFALFLYGFVSSTTTVELRGRKNDDDDTPTSFLFPLFPKFGVLGQKDLRLQLGKLAQKEKFLTQRNDGFGSGVVAVDSSSVFPVSGNVYPDGLYFTILRVGNPPKSYFLDVDTGSDLTWMQCDAPCINCGKGAHALYKPTRANVVSSVDSLCLDVQKKQKNGHHDESLLQCDYEIQYADHSSSLGVLVRDELHLVTTNGSKTKLNFAFGCGYDQEGSLLNTLAKTDGIMGLSRAKISLPYQLASKGLIKNVVGHCLSNDGAGGGYMFLGDDFVPYWGLTWVPMAYTLTTDFYQTEILGINYGNRQLRFDGQSKVGKVLNEVSGLGLVQDDSDTTLPICWQANFLIRSVKDVNDYFKTLTLQFGSKWWILSKLFQIPPEGYLIINNKGHVCLGILDSSNVNDGTTIILGGRTLILNENLKPYSNAVSVKFLHDISLRGYSVVYDNVKQKIGWKHADCSMPSRRLRKKNNFIPDSML 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0184 573 PANTHER ASPARTYL PROTEASE APCB1 414 510 - -
Aed7g0184 573 PANTHER ASPARTYL PROTEASE APCB1 526 558 - -
Aed7g0184 573 Pfam Xylanase inhibitor N-terminal 192 368 IPR032861 -
Aed7g0184 573 Gene3D Acid Proteases 172 368 IPR021109 -
Aed7g0184 573 Gene3D Acid Proteases 409 557 IPR021109 -
Aed7g0184 573 ProSiteProfiles Peptidase family A1 domain profile. 192 550 IPR033121 -
Aed7g0184 573 PANTHER ASPARTYL PROTEASES 414 510 IPR001461 GO:0004190|GO:0006508
Aed7g0184 573 PANTHER ASPARTYL PROTEASES 526 558 IPR001461 GO:0004190|GO:0006508
Aed7g0184 573 PANTHER ASPARTYL PROTEASES 16 412 IPR001461 GO:0004190|GO:0006508
Aed7g0184 573 MobiDBLite consensus disorder prediction 45 71 - -
Aed7g0184 573 SUPERFAMILY Acid proteases 183 555 IPR021109 -
Aed7g0184 573 MobiDBLite consensus disorder prediction 1 71 - -
Aed7g0184 573 PANTHER ASPARTYL PROTEASE APCB1 16 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0184 Aed-Chr7 1302060 1307045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0184 174 554 Miscellaneous Gene Families AT1G77480 41.294 3.66e-90 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0184 - - gmx:100810687 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0184 7 1302060 1307045 Aed7g0184 7 1302060 1307045 ECH