Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0167 ATGGAAGCTGCATTATGCAGTGCACTTGCTCTTTCACCCAACCAAGTATTCAATGCACCAAATCCTGGAGATAAAAATGTTCCTTTGAAATATAGCAAAGATCGGAGTGTTGTAATGACAGTGGCAGGCAGTGGAATATTAGGGAAAGGTGGTGGGTTGTTGGAGAGGCCAACCAAAGAGACAACATCACCTGGTCGGGAATCTGAATTTGACTTAAGGAAATCGCGAAAAACATCCCCACCATACAGAGTTTTGCTGCACAATGACAACTTCAACAAGCGAGAATACGTGGTGCAAGTGTTGATGAAGGTGATACCGGGAATGACAATTGATAATGCAGTTAACATCATGCAGGAGGCACATCATAACGGACTAGCAGTGGTGATTGTATGTGCTCAAGTGGATGCTGAAGACCACTGCATGCAGTTAAGAGGAAACGGCCTTTTAAGTTCAATTGAGCCAGCTGATGGTGGTGTCTCATACGGTGATGGCTCATTCACCGTTGGCGAATACGTCACCGAAACGGTGTCGTTTGGATCCGGCTCGGTTAATAAGGTTGCAATCGGATGTGGGCATGATAATGAAGGGCTATTCGTTGGGGCCGCTGGGCTTCTTGGGCTTGGAGGTGGGCCTCTGTCACTAACCTCGCAAATCAAAGCGTCGTCGTTTTCTTACTGTTTAGTGGATCGCGACTCGGGTAAATCCTCCACGCTCGAGTTCAACTCACCTCGACCCAGTGACTCGGTCGTTGCGCCGATGCTGAAGAACCAAAAGGTTAACACGTTTTATTACGTGGGGTTCACCGGATTTAGCGTGGGCGGGGAAAGTGTCTCCGTTCCGCCGGAGACTTTCGCCGTTGACCAGTCCGGTTCCGGAGGCGTGATTGTGGACTCGGGAACTGCCATAACTCGGTTGCGGACTGAGGCCTATAACTCAGTGCGTGACGCGTTCAAGAGGATGACTCAGAATCTGCGCCCTGCGGAGGGAGTTGCGCTTTTCGACACGTGCTACGACTTGTCGTCGTTGCAATCGGTGCGAGTGCCGACGGTGTCGTTTCATTTCAGCGGAGAGAAGACGTGGGCGCTGCCGGCGAAGAATTACTTGATTCCGGTGGACGGAGCCGGAACTTACTGCTTCGCGTTTGCGCCAACGACGTCGTCTCTGTCTATTATTGGGAACGTACAGCAGCAAGGGACACGTGTCAGCTTCGATCTAGCAAACTCTTTAGTGGGATTCTCGCCCAACAAGTGCTAG 1254 0.508 MEAALCSALALSPNQVFNAPNPGDKNVPLKYSKDRSVVMTVAGSGILGKGGGLLERPTKETTSPGRESEFDLRKSRKTSPPYRVLLHNDNFNKREYVVQVLMKVIPGMTIDNAVNIMQEAHHNGLAVVIVCAQVDAEDHCMQLRGNGLLSSIEPADGGVSYGDGSFTVGEYVTETVSFGSGSVNKVAIGCGHDNEGLFVGAAGLLGLGGGPLSLTSQIKASSFSYCLVDRDSGKSSTLEFNSPRPSDSVVAPMLKNQKVNTFYYVGFTGFSVGGESVSVPPETFAVDQSGSGGVIVDSGTAITRLRTEAYNSVRDAFKRMTQNLRPAEGVALFDTCYDLSSLQSVRVPTVSFHFSGEKTWALPAKNYLIPVDGAGTYCFAFAPTTSSLSIIGNVQQQGTRVSFDLANSLVGFSPNKC 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0167 417 MobiDBLite consensus disorder prediction 51 74 - -
Aed7g0167 417 SUPERFAMILY Acid proteases 159 417 IPR021109 -
Aed7g0167 417 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 145 IPR003769 GO:0030163
Aed7g0167 417 Pfam Xylanase inhibitor C-terminal 263 413 IPR032799 -
Aed7g0167 417 MobiDBLite consensus disorder prediction 60 74 - -
Aed7g0167 417 PANTHER ASPARTYL PROTEASES 159 417 IPR001461 GO:0004190|GO:0006508
Aed7g0167 417 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 159 417 - -
Aed7g0167 417 SUPERFAMILY ClpS-like 76 153 IPR014719 -
Aed7g0167 417 Gene3D - 76 151 IPR014719 -
Aed7g0167 417 ProSiteProfiles Peptidase family A1 domain profile. 112 413 IPR033121 -
Aed7g0167 417 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 294 305 IPR001969 GO:0004190|GO:0006508
Aed7g0167 417 Gene3D Acid Proteases 152 242 IPR021109 -
Aed7g0167 417 Gene3D Acid Proteases 243 417 IPR021109 -
Aed7g0167 417 Pfam Xylanase inhibitor N-terminal 154 240 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0167 Aed-Chr7 1155443 1159929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0167 131 417 Miscellaneous Gene Families AT1G77480 25.000 2.11e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0167 K22683 - gmx:100784849 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0167 7 1155443 1159929 Aed7g0167 7 1155443 1159929 ECH