Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0153 ATGCTTAGATATTTTCACCGAATTTCCGGCGACCGGCCATCCACCACTCCACCGGTTCAGCAACCCAACCGCAACGCCACTGCCGCCGACAACCAACCGACGCCGGTCGATGACGTCAGAGGAACTGACACGCCGCCGGAGAAGGCGCCGCGTCGGATTTCACCTTCAAATTTCGCGCCAAACAAGAACAACTCTGGTCCCTCCCTGTTTGAGAGCATCATGCACAAATTCGTCAAGGTCGATGACAACGAAAGAGTTACTCAGAGGAGTCACTCATTGAATGACAGTTTGCCTAAATCTTCTCCAGCAGTGGGGATATGTACTGATACTGATCGAAAAGGGGTGCACAAGGAAGAATCAGCTTTTCAACCTTTGGTGAAAGTGAAAGATAATGTTCTGAATTTCAAGAAAAAGACTATTAAGGAAAACATTCCACTGGTTGAAACTGACTATGAATGTGCTGGACCAGAAACCCCGGGGATGCAGCCTCTTGCTTCTCATGTGAAGCGAACTCGTGAGGATGGATCCAAGTTTGCTTCCTTGCTGAATTCTGGCAAAAGAGTTAGATTTCTGGACGATCCAATGGCATTGGAAATGACTAAGAAGGAAGCAGAAGTAGCTAGCAAGTTTGAATGGCTTGATCCTTCTCGAGTCAGGGATGCTAATGGAAGAAGGACAAATGATCCTTTGTATGACAGGACATCACTTTATATTCCTCCAGAAGTTTTGGGGAAAATGTCAGCATCACAGAAACAGTATTGGAGTGTCAAATGTAAATATATGGATGTTTTGCTATTTTTTAAAGTGGGAAAATTTTACGAGCTTTATGAAATGGATGCTGACATTGGCCATAAGGAGCTTGATTGGAAAATAACGTTAAGTGGTGTTGGAAAATGTCGGCAGGTTGGTATATCTGAAAGTGGGATTGATGATGCTGTTCAAAAGCTGGTTGCACGTGGGTATAAGGTTGGACGAGTGGAGCAAATAGAGACATCTGAAGAAGCAAAAGCTAGAGGATCTAACTCTGTTGTTCGGAGAAAATTAGTTCAGGTAGTCACTCCATCAACCAATGTGGATGGTACTATTGGTCCTGATGCTGTTCATCTTCTCGCAATAAAAGAGGAAAACAATGGCTTGGATAATGGTTCAGTTGTGTATGGATTTGCTTTTGTTGATTGTGCTCGACTTAGATTTTGGGTTGGCTCTATAGATGATGATGCATCCTGTTCTGCTTTGGGGGCTTTATTGATGCAAGTGTCACCCAAGGAAGTAATATATGATAGTAGAGGTTCAACAACACTGCAGTTCACTCCAGTTCAGTCAATCACTGACTTGGTGAACTCTGAAATTAGGGATTTAATTCACTCAAAGAGATACTTCAAAGGCTCATCTCATTCACTGGATCATGTACTGAGCAGTGTGATTCATCGTGAAATCACCTTGTCTGCTCTGGGTGGACTGATTGGTCATCTGGATAGATTGATGTTAGATAATGTCCTACAGAGTGGGGATCTATATTCATACCAAGTTTACAAAGGTTGCCTCAAAATGGATGGTCCAACAATGATAAATCTTGAACTCTTTGTTAATAATGAGGATGGTTCATTGTACAATTGTCTTGATAAGTGTATAACTTCAACTGGAAAGCGACTTCTTCGGAATTGGATCTGCTGTCCATTAATAGATTCTGATATAATTAACAACAGGCTTGATGTAGTGGATGATCTAATGGCTAATCCAGAGATTGTGTCACATATTGCTCAACATCTTCGCAAGCTTCCAGACTTGGAACATTTGCTTGGCCGAATTAAGTCCAGCCTTCAATTATCAGGCCCTCTCTTACTGCCCTTGTTGAGAAAGAAAATATTGAAGCAGAGGGTGAAAGTGTTTGGATCACTTGTGAAAGGCCTTCGGACTGCTTTGAGTTTGTTGCTTCTTCTACAGAAAGAGCAGCCTCTAATATCATCTTTGATCAAAGTTTTTAAACTTCCAATTCTGACTAGTAGTAATGGGCTTGATCAATTTCTTGCTCAGTTTGAAGCAGCTAATCATGACGTTACAGATTCAGATGCTGAAACACTCACAATACTTGCTGAACTATTTTTGGAGAAAGCTGCTCAGTGGTTTGAAGTTGTTCATGCCATCAATTGCATTGATGTATTAAGATCTTTTGCTGTTACTTCTACCTTTTCTTGTGGAACTATGTCTAGGCCAGTGATAGTGGCATCAAAAGGTACTGTGCTCAAGATGAAGGGACTATGGCATCCATTTGCCCTTGGAGACAGTGGATGCTTGCCTGTTCCCAATGATGTAGTCCTTGGTGAGAATGAAAATGGGTCTCATCCTCGCACTTTGCTGCTTACTGGACCAAACATGGGTGGAAAGTCAACACTTCTGCGTTCCACCTGTCTAGCTGTTATTATGGCCCAGCTAGGCTGTTATGTGCCATGTGAAAGTTGTGTTCTCTCAGTTGTGGATATAGTCTTTACACGACTTGGAGCCAAAGATAGAATCATGACAGGCGAGAGCACCTTCTTTATTGAGTGTACCGAAGCTGCATCAGTGCTTCAGAATGCTACTCAAGATTCTCTTGTCATCCTTGATGAATTGGGTCGGGGAACAAGCACTTTTGATGGCTATGCCATTGCATATGCAGTATTCCGGCATCTGATTGAAAAAGTGAACTGTCGCATGCTATTTGCCACACACTACCATCCACTCACGAAGGAGTTTGCTTCTCATCCACGTGTTATAATGCAACACATGGCTTGTGCTTTCAAGTCAAAACCAGATACCCACTCCATGCGTGATCAGGAGCTAGTTTTCCTATATCGGCTTGCCTCTGGAGCATGTCCAGAGAGCTACGGGCTGCAGGTTGCCCTCATGGCTGGAATCCCAGAAGAAACGGTAAACATTGCTTCTAAGGCAAGCCAACAGATGAAAAAATCAATTGGACAGAGTTTTAAGTCAAGCGAACAGAGATCAGAGTTCTCAACCCTTCATGAAGAATGGTTGAAGACCTTGGTATCTATCTCAAGAATACAGGATTGTAACTCTTTGGATGAAGATGCTTTAGATACATTAATCTGTCTGTGGTATGAACTCAAAACTTCATTTATATCAGGTAAGTAG 3132 0.4253 MLRYFHRISGDRPSTTPPVQQPNRNATAADNQPTPVDDVRGTDTPPEKAPRRISPSNFAPNKNNSGPSLFESIMHKFVKVDDNERVTQRSHSLNDSLPKSSPAVGICTDTDRKGVHKEESAFQPLVKVKDNVLNFKKKTIKENIPLVETDYECAGPETPGMQPLASHVKRTREDGSKFASLLNSGKRVRFLDDPMALEMTKKEAEVASKFEWLDPSRVRDANGRRTNDPLYDRTSLYIPPEVLGKMSASQKQYWSVKCKYMDVLLFFKVGKFYELYEMDADIGHKELDWKITLSGVGKCRQVGISESGIDDAVQKLVARGYKVGRVEQIETSEEAKARGSNSVVRRKLVQVVTPSTNVDGTIGPDAVHLLAIKEENNGLDNGSVVYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPKEVIYDSRGSTTLQFTPVQSITDLVNSEIRDLIHSKRYFKGSSHSLDHVLSSVIHREITLSALGGLIGHLDRLMLDNVLQSGDLYSYQVYKGCLKMDGPTMINLELFVNNEDGSLYNCLDKCITSTGKRLLRNWICCPLIDSDIINNRLDVVDDLMANPEIVSHIAQHLRKLPDLEHLLGRIKSSLQLSGPLLLPLLRKKILKQRVKVFGSLVKGLRTALSLLLLLQKEQPLISSLIKVFKLPILTSSNGLDQFLAQFEAANHDVTDSDAETLTILAELFLEKAAQWFEVVHAINCIDVLRSFAVTSTFSCGTMSRPVIVASKGTVLKMKGLWHPFALGDSGCLPVPNDVVLGENENGSHPRTLLLTGPNMGGKSTLLRSTCLAVIMAQLGCYVPCESCVLSVVDIVFTRLGAKDRIMTGESTFFIECTEAASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHPLTKEFASHPRVIMQHMACAFKSKPDTHSMRDQELVFLYRLASGACPESYGLQVALMAGIPEETVNIASKASQQMKKSIGQSFKSSEQRSEFSTLHEEWLKTLVSISRIQDCNSLDEDALDTLICLWYELKTSFISGK 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0153 1043 ProSitePatterns DNA mismatch repair proteins mutS family signature. 863 879 IPR000432 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 MobiDBLite consensus disorder prediction 1 67 - -
Aed7g0153 1043 SUPERFAMILY DNA repair protein MutS, domain III 518 729 IPR036187 -
Aed7g0153 1043 SMART DNAend 531 761 IPR007696 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 CDD ABC_MSH6_euk 749 973 - -
Aed7g0153 1043 Gene3D - 736 1027 IPR027417 -
Aed7g0153 1043 SMART mutATP5 782 978 IPR000432 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 MobiDBLite consensus disorder prediction 13 32 - -
Aed7g0153 1043 Pfam MutS domain V 786 980 IPR000432 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 Gene3D DNA repair protein MutS, domain I 205 365 IPR016151 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 232 1035 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Aed7g0153 1043 Gene3D MutS, connector domain 367 516 IPR036678 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 Pfam MutS domain II 369 499 IPR007860 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 Pfam MutS domain III 521 725 IPR007696 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 PANTHER DNA MISMATCH REPAIR PROTEIN MSH7 232 1035 - -
Aed7g0153 1043 MobiDBLite consensus disorder prediction 85 105 - -
Aed7g0153 1043 SUPERFAMILY DNA repair protein MutS, domain II 369 528 IPR036678 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 Pfam MutS domain I 249 359 IPR007695 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 SUPERFAMILY DNA repair protein MutS, domain I 236 356 IPR016151 GO:0005524|GO:0006298|GO:0030983
Aed7g0153 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 738 982 IPR027417 -
Aed7g0153 1043 Gene3D - 517 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0153 Aed-Chr7 1049046 1056989 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0153 K08737 - gmx:100818859 1828.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0153 7 1049046 1056989 Aed7g0153 7 1049046 1056989 ECH