Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2347 ATGGGTGTCTTCACATTCGAGGATGAAATGACCTCCGCTGTGGCTCCTGCTACACTTTACAAAGCTCTAGTTACAGATGCCGACAGCATCATCCCAAAGGCTGTCGATTCCTTCAAGAGTGTTGAATTCGTTGAGGGAAATGGTGGCCCTGGAAGCATCAAGAAGATCTCTTTCGTTGAGGATGGAGAAACCAAGTTTGTGTTGCACAAAATAGAAGCACTTGATGAAGCTAACTATGGATATAGCTACAGCATTGTTGGAGGTGTTGCCTTGCCAGAGACAGTAGAGAAGATCACATTCGACACCAAATTGTCTGCTGGTCCCAATGGAGGCTCTGTTGGAAAGCAGACTGTCAGATTCCAAACAAAAGGAGATGCTCAGCCCAACGAAGAAGAGCTCAAAGTTGGCAAAGCCAAAGCTGAAGGACTCTTCAAGGCCATTGAAGCTTACCTTTTGGCCAACTCAGCTTAA 471 0.4607 MGVFTFEDEMTSAVAPATLYKALVTDADSIIPKAVDSFKSVEFVEGNGGPGSIKKISFVEDGETKFVLHKIEALDEANYGYSYSIVGGVALPETVEKITFDTKLSAGPNGGSVGKQTVRFQTKGDAQPNEEELKVGKAKAEGLFKAIEAYLLANSA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2347 156 PANTHER - 1 155 - -
Aed6g2347 156 SUPERFAMILY Bet v1-like 2 155 - -
Aed6g2347 156 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Aed6g2347 156 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed6g2347 156 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed6g2347 156 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed6g2347 156 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed6g2347 156 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed6g2347 156 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed6g2347 156 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed6g2347 156 PANTHER ABA-RESPONSIVE PROTEIN 1 155 - -
Aed6g2347 156 CDD Bet_v1-like 4 151 - -
Aed6g2347 156 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 88 120 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed6g2347 156 Gene3D - 2 156 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2347 Aed-Chr6 25311268 25311839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2347 - - gmx:100527097 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2347 6 25311268 25311839 Aed6g2347 6 25311268 25311839 ECH