Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2335 ATGACCATCGACTTAGATTCGATCGCTCGCAGAGTCGAGGTTGATGATCGCATTCCCCTCCGCTATTACTATCGAATTGCCGATAACCTCCTCAAGCAGGCTGGTATCTACCGCGAGGAGAATAATGTAGTTGACTTGTACATCATTCTCCTTAGATTTTTAAGTTTGGTTTCTGAAACTATACCATATCACCGAGATTATCAAGCTACACTGCCCAACGAAAGAGCAGCATATAAGAAGAGATCACGAGCTGTTTTGGATGAGCTTGAATCTTTGAAGCCTGAATTTAAACGCCGGGTGGACAAATTGAATGACTCACTTGTAAAAGCTCCATTGCCTGAAGAAAATGGCTTCAATAATAAGGCTTTGCAGAGTTCAGTGAATTCATCTATGGAATGGCCGGCTGTCAACAAAAGTAATAACTTAAGCATGGATTTTCAACAGCCTGCTGCTGGATTTGGTTCACCCTCTTCATGGAATTATAATAATATGTTATCTTTAGATTCCAGGCCTATTGACAAGCAGTTTCAGAAACTATCTATTAGTCTACCCCCTCCAAATAAGGAGACTTTATCCAGACACTCATTTTTAGGACCAAGTGGCCTTCGGGGCCAATGGCGTGGACCTAGTGCAGAAATAAAGGTACAATATCCAAGCAGTAGTGATCTCACACATGCCAAGAATTCAAGCCTGAATCAGGCTGGGCTTTATGATCTTGTGGCAATTAAAGATGGCGATCAAGGACCAGTTACATCCACAATGGACTCAGTTCTCTCCTTGGATGATGGAAGCTGGTTGCGTCCTGCTGTTGAGTCCTGTTCTCCTGTTGTAACCGAGTCAAGGGAGGACCCCTTACAATTGCTCAACATCAAGCAACCTTTGCCGCCTCCTGTTCTTGCTCAGGTGTACCCAGAACATGCCCCTATTCCTCCTTCAAAAGTTGCAGATCCAAGGCCAGGGCCAGCTAAATCATCTCATGATTCTGGATTTGGTTCAACTACATATCAACACCTACATATTCCTGTCAAAATGATGGAAGATTTTTTGAGATTAGCTTCGGAAAACACACGGAAGAACTTAGAGACATGTGGTGTTCTTGCAGGGTCCCTGTGTCAAACATTGAACGAAGAAGAAATATTTGAAGTTCAAGATGGCTTATCACTTTTTCCTTTAGGTTGGATACATACACACCCCTCACAGACTTGTTTCATGTCTTCTGTGGATTTACACACTCATTACTCATACCAGATCATGTTACCAGAGGCAATTGCTATTGTCATGGCCCCTACAGATACTACAAGTCCACATGGCATATTTCATCTTTCTGATCCGAGTGGTGTGTCTGTAATTCGTAACTGTCAACAACGTGGATTTCATCCCCATGAGGAGCCTGAGGATGGAACTCCAATATATGAGCACTGTTCTCATGTCTATATGAATGCTAACTTGAAGTACGATGTTGTTGATCTTCGAGAGCGATGA 1482 0.4285 MTIDLDSIARRVEVDDRIPLRYYYRIADNLLKQAGIYREENNVVDLYIILLRFLSLVSETIPYHRDYQATLPNERAAYKKRSRAVLDELESLKPEFKRRVDKLNDSLVKAPLPEENGFNNKALQSSVNSSMEWPAVNKSNNLSMDFQQPAAGFGSPSSWNYNNMLSLDSRPIDKQFQKLSISLPPPNKETLSRHSFLGPSGLRGQWRGPSAEIKVQYPSSSDLTHAKNSSLNQAGLYDLVAIKDGDQGPVTSTMDSVLSLDDGSWLRPAVESCSPVVTESREDPLQLLNIKQPLPPPVLAQVYPEHAPIPPSKVADPRPGPAKSSHDSGFGSTTYQHLHIPVKMMEDFLRLASENTRKNLETCGVLAGSLCQTLNEEEIFEVQDGLSLFPLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTTSPHGIFHLSDPSGVSVIRNCQQRGFHPHEEPEDGTPIYEHCSHVYMNANLKYDVVDLRER 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2335 493 MobiDBLite consensus disorder prediction 183 205 - -
Aed6g2335 493 Gene3D - 2 125 - -
Aed6g2335 493 SUPERFAMILY USP8 N-terminal domain-like 4 104 - -
Aed6g2335 493 MobiDBLite consensus disorder prediction 307 331 - -
Aed6g2335 493 ProSiteProfiles MPN domain profile. 270 447 IPR037518 -
Aed6g2335 493 PANTHER AMSH-LIKE PROTEASE 3 491 - -
Aed6g2335 493 Gene3D Cytidine Deaminase, domain 2 371 493 - -
Aed6g2335 493 Gene3D Cytidine Deaminase, domain 2 322 370 - -
Aed6g2335 493 CDD MPN_AMSH_like 335 491 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Aed6g2335 493 Coils Coil 86 106 - -
Aed6g2335 493 SUPERFAMILY JAB1/MPN domain 337 446 - -
Aed6g2335 493 SMART pad1_6 337 444 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aed6g2335 493 Pfam USP8 dimerisation domain 4 99 IPR015063 -
Aed6g2335 493 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 389 420 IPR000555 GO:0005515|GO:0008233|GO:0008237
Aed6g2335 493 PANTHER AMSH-LIKE UBIQUITIN THIOESTERASE 3 3 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2335 Aed-Chr6 25223837 25231654 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2335 K11866 - gmx:100812784 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2335 6 25223837 25231654 Aed6g2335 6 25223837 25231654 ECH