Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2325 ATGTGTGGAGCAACTAAGGGGTTGGTGAGTGGGGGGACAAAGATGGTTCTTCAGTATCGTCTATACCTGAGTGCTTTTGTGCATCTAGATTACGTTGAACCTGAGCTTGAGCTTATTGCTTACATCAGTTGGCATACTATGAACCATGAGTTACCTATTTCCGCTCCGCTCTCACCGAAGAGACAGTGCCTGGCAAGTGAAACTGCGATCGATTGGAGGCTCTATTCTTCCTTGTTTGGATTTGGATTGAAAGATGAGTACCTTGAAATTTTGCCGCCGATGCAACAACGTTCTGTACCCTACGGAGGACAAGGAGGACAAGCTCCTTCTCCATGCTTGCCGCCACTGCAATCACGAGACAGTAACGTTGTCTATAGAAATAAGATACATCATTCTGCTCAACGGTGCACTCGAAATCTGGAAAATGTAGCTGCAGATCCAACACTTCCTCGCACCAAGTCTGTTCGCTGCTCTCAATGCAATCATGGAGAAGCTGTCTTTTTCAAGGCACCAGTCAAAGGGGAAGAAGGCATGGCACTCAATTTTGTTTGCTGCAACCCAACTTGTGGTAACCGTTGGAGAGACTAG 588 0.4677 MCGATKGLVSGGTKMVLQYRLYLSAFVHLDYVEPELELIAYISWHTMNHELPISAPLSPKRQCLASETAIDWRLYSSLFGFGLKDEYLEILPPMQQRSVPYGGQGGQAPSPCLPPLQSRDSNVVYRNKIHHSAQRCTRNLENVAADPTLPRTKSVRCSQCNHGEAVFFKAPVKGEEGMALNFVCCNPTCGNRWRD 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2325 195 PANTHER DNA-DIRECTED RNA POLYMERASE SUBUNIT 119 195 - -
Aed6g2325 195 PANTHER DNA-DIRECTED RNA POLYMERASE 119 195 IPR012164 GO:0006351
Aed6g2325 195 CDD Zn-ribbon_RPB9 145 194 IPR034012 GO:0006379
Aed6g2325 195 ProSiteProfiles Zinc finger TFIIS-type profile. 153 194 IPR001222 GO:0003676|GO:0006351|GO:0008270
Aed6g2325 195 Gene3D - 128 195 - -
Aed6g2325 195 Pfam Transcription factor S-II (TFIIS) 156 194 IPR001222 GO:0003676|GO:0006351|GO:0008270
Aed6g2325 195 SUPERFAMILY Zinc beta-ribbon 140 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2325 Aed-Chr6 25159856 25162698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2325 K03017 - gmx:100806190 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2325 6 25159856 25162698 Aed6g2325 6 25159856 25162698 ECH