Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2314 ATGAACGCCCTCCCTTCTTCTTCCTCTTCCACCTTCACTTTCTTAACTCAGTCCAAAAACCCCAACTATCTCTTCAAGTTCATACATAAGGTACCCATTTTACCCCTACACTCACCTGCTCCATGTTGTTCTCTCAGTGACTCGTCATCATCCTCGTCGACCACAGTGCTCGACAAAAATTCCCTTTCATCCGAACAGAATTCTCGCATTGCAGTTTCGCCAGAAGAATCGAGCTCAGGGGAAGACCTCGTGGTTCGCCGGCCGGTGACGATTTTTTCCGGCGAAGACTCCGGCAAGGAGGAAGAAGAAGAAGAAGAAGAAGATGACGCAAAGGCTTCGGCGATCGACGCGGGGCTTGCGAGATTCGCGAAGAAGATACCGATGTTTGAGCCGGAGAGGGTGGAATCCAAAGAGAGGCCCCTCTTAATTAATTTGGACTTAGCGTTATACAGGGCGAAGCTTTTGGCCAGAAGAACCTTTCAGTATGAAGAACCAGAGGCATTACTTCGAAAGTGTATAAGCTATTGGCCGGAGGATGGTCGACCTTACGTTGTACTTGGAAAGATTTTGAGCAAGCAATCCAAAACAAGTGAAGCCAGAGAGATATACGAGAAGGGTTGCCAGGCTACGCAGGGTGAAAATGCCTACATTTGGCAGTGCTGGGCTGTTCTAGAAATGCAAATGGGAAATATCAGGAAAGCAAGAGAGTTGTTTGATGCTGCCACGGTTGCTGATAAGAGGCATGTTGCTGCTTGGCATGGATGGGCAGTTCTAGAATTAAAGCAGGGGAATCTAAATAAGGCAAGGAGTCTACTTGGTAAAGGTCTTCAATATTGTGGGCAGAATGAGTACATATACCAAACACTTGCACGGCTTGAAGCTAGAGCAGATAGATATCAGCAGGCTCGATATTTATTCAATCAGGCCACTAAGTGTAATCCTAATAGTTGTGCTAGTTGGCTTGGTTGGGCGCAAATGGAGGTGGAACAGGAAAACTACCGTGCTGCTAGGAAATTGTTTGAGGTTAAAGCAGTACAGGCTAGTCCTAAAAATAGGTATGCTTGGCATGTGTGGGGCGTTTTTGAAGCTAACATGGGCAACATTGACAAGGGAAGAAAACTTTTAAAGATAGGTCATAATCTAAATCCGAGGGATGCTGTTCTACTTCAATCTCTTGCTTTATTAGAATACCAACACTCAACTGCAAACCTTGCTCGAGTTTTGTTCAGGAGAGCATCTGAATTGAATCCAAGGCACCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAAGGGAACTTAAATAAAGCCAGACAATTATACCAAAAAACTTTATCGATTGATCAAAATAGTGAAACTGCTGCCAGATGTCTCCAGGCTTGGGGTGTTTTGGAGCATAGGGTTGGCAATCTTTCAGCTGCTCGTAGATTATTTAAATCATCGTTGAATATAAATTCTCAGAGTTATGTGACATGGATGACTTGGGCATCAGTGGAGGAAGAACAAGGAAATTCTCGCACAGAAGTTGTAGATGATGCTTCATGGGTTATGGGATTCCTAGGTATTTTAGATCCAGCCATTGACAGTTTAAAGAGAATCCTCAAGCTGAACCCAAATTCGTACAACATGCCATTGGATTCTTTGAGGAACATTGTGGGAACAAATAAAAACAGAGTTGACGACGAGGATGATGATGATGATGCAAATGATAAAAGTGACTTTGATTTGGATGCTTTCATTAAGGAAAAGCTAACCTTAGATTTGTCCAATCTAGAAGTTCAGTTGGAAACACCAAAATTTTATTCTGTGAAGAGAAGTACGTCTCCTAGAAGGATATGGCGACGATCAGTTAATAGAATTGCCGAAGTGCAAGTCACACAGTAA 1890 0.4354 MNALPSSSSSTFTFLTQSKNPNYLFKFIHKVPILPLHSPAPCCSLSDSSSSSSTTVLDKNSLSSEQNSRIAVSPEESSSGEDLVVRRPVTIFSGEDSGKEEEEEEEEDDAKASAIDAGLARFAKKIPMFEPERVESKERPLLINLDLALYRAKLLARRTFQYEEPEALLRKCISYWPEDGRPYVVLGKILSKQSKTSEAREIYEKGCQATQGENAYIWQCWAVLEMQMGNIRKARELFDAATVADKRHVAAWHGWAVLELKQGNLNKARSLLGKGLQYCGQNEYIYQTLARLEARADRYQQARYLFNQATKCNPNSCASWLGWAQMEVEQENYRAARKLFEVKAVQASPKNRYAWHVWGVFEANMGNIDKGRKLLKIGHNLNPRDAVLLQSLALLEYQHSTANLARVLFRRASELNPRHQPVWFAWGWMEWKEGNLNKARQLYQKTLSIDQNSETAARCLQAWGVLEHRVGNLSAARRLFKSSLNINSQSYVTWMTWASVEEEQGNSRTEVVDDASWVMGFLGILDPAIDSLKRILKLNPNSYNMPLDSLRNIVGTNKNRVDDEDDDDDANDKSDFDLDAFIKEKLTLDLSNLEVQLETPKFYSVKRSTSPRRIWRRSVNRIAEVQVTQ 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2314 629 MobiDBLite consensus disorder prediction 54 75 - -
Aed6g2314 629 ProSiteProfiles TPR repeat profile. 420 453 IPR019734 GO:0005515
Aed6g2314 629 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 17 618 IPR044624 GO:0003729|GO:0006397
Aed6g2314 629 SMART tpr_5 386 419 IPR019734 GO:0005515
Aed6g2314 629 SMART tpr_5 457 490 IPR019734 GO:0005515
Aed6g2314 629 SMART tpr_5 317 351 IPR019734 GO:0005515
Aed6g2314 629 SMART tpr_5 180 213 IPR019734 GO:0005515
Aed6g2314 629 SMART tpr_5 215 248 IPR019734 GO:0005515
Aed6g2314 629 SMART tpr_5 352 385 IPR019734 GO:0005515
Aed6g2314 629 SMART tpr_5 283 316 IPR019734 GO:0005515
Aed6g2314 629 SMART tpr_5 249 282 IPR019734 GO:0005515
Aed6g2314 629 SMART tpr_5 420 453 IPR019734 GO:0005515
Aed6g2314 629 MobiDBLite consensus disorder prediction 54 81 - -
Aed6g2314 629 Gene3D Tetratricopeptide repeat domain 153 388 IPR011990 GO:0005515
Aed6g2314 629 Gene3D Tetratricopeptide repeat domain 389 552 IPR011990 GO:0005515
Aed6g2314 629 SMART hat_new_1 471 503 IPR003107 GO:0006396
Aed6g2314 629 SMART hat_new_1 400 432 IPR003107 GO:0006396
Aed6g2314 629 SMART hat_new_1 366 398 IPR003107 GO:0006396
Aed6g2314 629 SMART hat_new_1 229 261 IPR003107 GO:0006396
Aed6g2314 629 SMART hat_new_1 263 295 IPR003107 GO:0006396
Aed6g2314 629 SMART hat_new_1 194 227 IPR003107 GO:0006396
Aed6g2314 629 SMART hat_new_1 331 364 IPR003107 GO:0006396
Aed6g2314 629 SMART hat_new_1 297 329 IPR003107 GO:0006396
Aed6g2314 629 Pfam Tetratricopeptide repeat 224 273 - -
Aed6g2314 629 SUPERFAMILY TPR-like 349 543 IPR011990 GO:0005515
Aed6g2314 629 SUPERFAMILY TPR-like 153 396 IPR011990 GO:0005515
Aed6g2314 629 ProSiteProfiles TPR repeat profile. 283 316 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2314 - - gmx:100801939 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2314 6 25114988 25119282 Aed6g2314 6 25114988 25119282 ECH