Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2305 ATGAATATCACTGCTCCTTTATATGGGCAGCAATTCGACGTCGTTTCGGATGACTCAGATCACCACTTTCTGGGTGGTTCAAACGATGGACAATGTTTCAACGATTCAAAGAGTAAAGTGTACAAAAGCATAATGAAAGAGTGGAAAATCCTGGAGCAAAACTTACCCGAATCATCCATCTATGTCCGGGTCTACGAGCGACGCATTGGTCTAATGAGGGCCGTGATCGTAGGTGCCGCCGGCACACCGTACCACGATGGTCTATTCTTCTTCGACATTGCTTTTCCCTCGGATTACCCTCAAAATCCTCCAAAGCTTCATTACCACTCGTTCTGA 336 0.4613 MNITAPLYGQQFDVVSDDSDHHFLGGSNDGQCFNDSKSKVYKSIMKEWKILEQNLPESSIYVRVYERRIGLMRAVIVGAAGTPYHDGLFFFDIAFPSDYPQNPPKLHYHSF 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2305 111 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 39 111 IPR000608 -
Aed6g2305 111 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 10 111 - -
Aed6g2305 111 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 10 111 - -
Aed6g2305 111 Pfam Ubiquitin-conjugating enzyme 44 109 IPR000608 -
Aed6g2305 111 SUPERFAMILY UBC-like 35 110 IPR016135 -
Aed6g2305 111 Gene3D Ubiquitin Conjugating Enzyme 1 111 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2305 Aed-Chr6 25078391 25078726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2305 10 110 Miscellaneous Gene Families AT2G33770 55.446 3.15e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2305 K10581 - gmx:100791343 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2305 6 25078391 25078726 Aed6g2305 6 25078391 25078726 ECH