Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2287 ATGCTTCTCTTAAGTCCTGTTACTCCCGGTCAGGTCTCGTTCTTGCTCGGGATCATTCCGGTCGTTGTGGCATGGATATATTCGGAGATATTGGAGTATCGCAAAAATTCTGTCTCGTCCAGAGCGCAATCAGACATCAACTTAGTTGAAATGAGCAGTGATGTCGTTAAAGACGAAGACAGAGCAGTTTTACTGGAGGGAGGAGCTCTACAGTCAGGATCCCCGAGGGCACGGAGCGTAACTGCCTCACCGTCAATTATCCGATTCCTTTTGATGGATGAGTATTTCCTTCTTGAAAACCGTTTGACACTTAGAGCAATCTCTGAATTTGGTCTCATTTTGGCTTACTTTTATTTGTGCGACCGCACAGATTTATTTGCCTCGTCAAAAAAGAGTTATAATAGGGATCTCTTCCTATTTCTCTATTTTCTCCTCATCATAGTTTCGGCTATGACTTCCTTTAAGATACATCATGACAAGTCACCATTTTCTGGGAAATCCATCCTTTACTTAAATAGACACCAGACTGAAGAATGGAAAGGCTGGATGCAGGTTTTGTTTTTGATGTACCACTACTTTGCTGCATCTGAAATCTACAATGCAATCCGTTTGTTCATTGCTGCATATGTTTGGATGACTGGATTTGGAAACTTCTCATATTATTATATTCGTAAAGATTTTAGTCTAGCAAGATTTGCTCAGATGATGTGGCGGCTTAATTTCTTTGTGGTGTTCTGTTGTATTGCACTTAACAACAGTTACATGTTATACTACATCTGTCCCATGCACACTCTTTTCACTCTTATGGTTTATGGGGCACTTGGTATTCTCCACAAGTACAATGAGACTGGGTCGGTCATTGCTTTAAAAATCATTGCTTGCTTCTTGGTTGTTATCTTAGTATGGGAGATACCTGGAGTCTTTGAATTGCTTTGGAGTCCATTTACTTTCTTTCTCGGTTACACTGACCCAAATCCTGCAAAATCACATCTTTCTCGCTTGCATGAATGGCATTTTCGTTCAGGGCTTGATCGCTACATATGGATAATTGGAATGATTTATGCTTATTATCATCCAACTGTTGAACGATGGATGGAAAAATTGGAGGAAGCAGAAATGAAGCGCAGAATATTAATCAAAGCAACTGTTGTGCTGATTTGTTCATCGGTGGGTTATTTATGGTTTGAGCATATATACAAGCTGGACAAGGTTTCATATAATAAATACCATCCTTATACCTCATGGATTCCCATAACGGTTTACATATGCTTGCGGAATGTTACACAAAGTTTACGTAGCTATACACTGACCCTTTTTGCATGGCTTGGGAAGATTACATTGGAGACTTACATCTCCCAGATCCATATCTGGTTAAGGTCAGGTGTTCCAGACGGGCAACCCAAATTCTTGCTTTCCCTGATCCCAGACTACCCAATGTTGAACTTCATGCTCACTACTTCCATATATGTTGCAATTTCCTATAGGCTTTTTGACCTGACAAATACACTGAAAGTGGCATTTGTACCTAGCAAAGATGACAAACGTCTTATACACAATTTAATTACAGGAACAACTATCTCAGTTGTTTTATATTCTTTGTCATTCGGCTTCCTTAGGATACCTCAAATGTTGCTTCCCGTGGACCCGGAAGAATTCTGGGCAGCTGCTACAATTGGTTTGTGA 1683 0.4023 MLLLSPVTPGQVSFLLGIIPVVVAWIYSEILEYRKNSVSSRAQSDINLVEMSSDVVKDEDRAVLLEGGALQSGSPRARSVTASPSIIRFLLMDEYFLLENRLTLRAISEFGLILAYFYLCDRTDLFASSKKSYNRDLFLFLYFLLIIVSAMTSFKIHHDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRLFIAAYVWMTGFGNFSYYYIRKDFSLARFAQMMWRLNFFVVFCCIALNNSYMLYYICPMHTLFTLMVYGALGILHKYNETGSVIALKIIACFLVVILVWEIPGVFELLWSPFTFFLGYTDPNPAKSHLSRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEEAEMKRRILIKATVVLICSSVGYLWFEHIYKLDKVSYNKYHPYTSWIPITVYICLRNVTQSLRSYTLTLFAWLGKITLETYISQIHIWLRSGVPDGQPKFLLSLIPDYPMLNFMLTTSIYVAISYRLFDLTNTLKVAFVPSKDDKRLIHNLITGTTISVVLYSLSFGFLRIPQMLLPVDPEEFWAAATIGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2287 560 Pfam 10 TM Acyl Transferase domain found in Cas1p 103 516 IPR012419 -
Aed6g2287 560 PANTHER PROTEIN REDUCED WALL ACETYLATION 2 7 542 - -
Aed6g2287 560 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 7 542 - -
Aed6g2287 560 Coils Coil 361 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2287 Aed-Chr6 24945297 24951186 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2287 K03377 - gmx:100794337 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2287 6 24945297 24951186 Aed6g2287 6 24945297 24951186 ECH