Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2281 ATGACGGTGGTCGGACTCTTCATCACCGCCACGAAGCTCGCCGGAGCTCTGTTCACTCTCACCGTCGCCGCCAACGCCTTCTCCTACTCCCGCTTTCGCAAGAACAACCTTCGCCGTTTCCGCTCCCCCATCGATGAATCCCAAGACACTCTCGCAGACTTTAACGTCGCCGAAGGGGAAGATGGATTTTTCTTTGGTTTGGCGACAGCGCCAGCACATGTTGAGGACAGGCTTGATGATGCTTGGATCCAGTTTGCAAAGAGTAGTAGTGAAGGTGGTGTCTCAGAGGAGAGGCAGAGAGTGGATGCTGTTATAGGTTCTGCTTCTGGCGATGGTGGGTCCCAGCAGGCCGCAACAGCAACATCTCCGCGGCGGAGCAGGAAGCCTCTTAAGGTGGCCATGGAGGCCATGATTAGGGGGATTGAGAAGTACATGGAAGTGGAAGGCCAAGAAGGAGAAGAAAAAGAAAAAGAAGAAGAAGTCCGTCCTAATGTATCTGCTTGGCATAATGTTCCACGCCCGGAGGAGAGGTTAAGGTTTTGGTCTGATCCTGAAACAGAAATAAAATTGGCTAAGGATACCGGTGTTACAGTTTTTCGCATGGGAATAGATTGGTCAAGAATCATGCCAGTGGAGCCAGTAAACAGACTTAATGAATCTGTTAACTATGCTGCATTGGAACGGTATAAGTGGATTATCAATAGGGTTCGATCATATGAAATGAAAGTGATGCTCACTCTTTTTCATCACTCGCTTCCACCCTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGTAAACAGTGTGCTAGATTTGGTAGACTATTGGGTAACATTTAATGAGCCCCATGTGTTCTGTATGCTTACTTATTGTGCTGGAGCTTGGCCTGGTGGTGATCCTGATATGCTTGAGGCTGCTACTTCTGCACTTCCAACTGGTGTTTTCCAGCAGGCCATGCATTGGATGTCTATTGCACACTCAAAGGCATATGATTACATCCATGGACTAAGTAACCCATTAAATTCAATAGTGGGTGTAGCACATCATGTGTCATTTATGCGACCCTATGGTTTGTTTGATATTGCTGGTGTTTCACTGGCTAATTCATTGACTCTCTTCCCATACATTGATGCAATATCTGAGAAGCTGGACTATATAGGCATAAACTACTATGGGCAGGAAGTGGTTTCTGGTGCTGGCCTGAAGCTGGTGGAAAACGATGAGTACAGTGAATCTGGTCGTGGGGTATACCCTGATGGCTTATACCGCATGTTGCTTCAGTACCATGAAAGATACAAACACCTAAATATTCCCTTCATCATTACTGAGAATGGTGTTTCAGATGAGACAGATTTGATCCGGCGGCCATATCTCTTGGAACATTTGCTTGCTATTTATGCTGCCATGATCATGGGTGTGCGGGTACTTGGTTACCTGTTCTGGACAATTTCTGATAACTGGGAGTGGGCCGATGGATATGGTCCCAAGTTTGGACTTGTCGCTGTTGACCGGGCAAATAATCTTGCACGGATCCCTCGCCCCTCTTACCATCTATTTGCTAAGATAGTGAATACAGGGAAAGTTACACGTGAAGATCGTGAAAGAGCATGGGATGAACTCCAAAGAGCCGCGAAAGAGAAGAAAACAAGGCCATTTTATCGGGCTGTGGATAAACACCGTTTAATGTATGCAGGTGGACTTGATGAACCTGAACAGCGAGCTTATATAGAACGAGATTGGCGGTTTGGTCATTATGAAATGGATGGACTCCAAGATCACTTGAGCCGCTTCTCAAGATCCATTTTCCGACCATTCTCCCTTAAAAGGAAACCAAAATCTCAAAACAAGAATCCCAAGTTAATTCTTCAGCCTCTTGAAGCTTAG 1923 0.4623 MTVVGLFITATKLAGALFTLTVAANAFSYSRFRKNNLRRFRSPIDESQDTLADFNVAEGEDGFFFGLATAPAHVEDRLDDAWIQFAKSSSEGGVSEERQRVDAVIGSASGDGGSQQAATATSPRRSRKPLKVAMEAMIRGIEKYMEVEGQEGEEKEKEEEVRPNVSAWHNVPRPEERLRFWSDPETEIKLAKDTGVTVFRMGIDWSRIMPVEPVNRLNESVNYAALERYKWIINRVRSYEMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVNSVLDLVDYWVTFNEPHVFCMLTYCAGAWPGGDPDMLEAATSALPTGVFQQAMHWMSIAHSKAYDYIHGLSNPLNSIVGVAHHVSFMRPYGLFDIAGVSLANSLTLFPYIDAISEKLDYIGINYYGQEVVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQYHERYKHLNIPFIITENGVSDETDLIRRPYLLEHLLAIYAAMIMGVRVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFAKIVNTGKVTREDRERAWDELQRAAKEKKTRPFYRAVDKHRLMYAGGLDEPEQRAYIERDWRFGHYEMDGLQDHLSRFSRSIFRPFSLKRKPKSQNKNPKLILQPLEA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2281 640 MobiDBLite consensus disorder prediction 106 128 - -
Aed6g2281 640 MobiDBLite consensus disorder prediction 109 123 - -
Aed6g2281 640 PRINTS Glycosyl hydrolase family 1 signature 464 475 IPR001360 GO:0004553|GO:0005975
Aed6g2281 640 PRINTS Glycosyl hydrolase family 1 signature 452 460 IPR001360 GO:0004553|GO:0005975
Aed6g2281 640 PRINTS Glycosyl hydrolase family 1 signature 395 409 IPR001360 GO:0004553|GO:0005975
Aed6g2281 640 PRINTS Glycosyl hydrolase family 1 signature 485 502 IPR001360 GO:0004553|GO:0005975
Aed6g2281 640 PRINTS Glycosyl hydrolase family 1 signature 509 521 IPR001360 GO:0004553|GO:0005975
Aed6g2281 640 Pfam Glycosyl hydrolase family 1 185 369 IPR001360 GO:0004553|GO:0005975
Aed6g2281 640 Pfam Glycosyl hydrolase family 1 390 538 IPR001360 GO:0004553|GO:0005975
Aed6g2281 640 PANTHER GLYCOSYL HYDROLASE 3 597 IPR001360 GO:0004553|GO:0005975
Aed6g2281 640 ProSitePatterns Glycosyl hydrolases family 1 active site. 452 460 IPR018120 -
Aed6g2281 640 PANTHER GALACTOLIPID GALACTOSYLTRANSFERASE SFR2, CHLOROPLASTIC 3 597 - -
Aed6g2281 640 SUPERFAMILY (Trans)glycosidases 165 544 IPR017853 -
Aed6g2281 640 Gene3D Glycosidases 142 550 - -
Aed6g2281 640 MobiDBLite consensus disorder prediction 621 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2281 Aed-Chr6 24912083 24916119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2281 6 615 Glycoside Hydrolase AT3G06510 62.751 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2281 K21362 - gmx:100792401 1173.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2281 6 24912083 24916119 Aed6g2281 6 24912083 24916119 ECH