Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2279 ATGGTGTTAGCTTCCCCAAGGCCAAAGGCAATAATAATAAGGAGCGAAGAAGAAGAAGATGAGAATAAAAATAATAATGATAATAATAATGAGGTTGTTGTTATTCCCGTTGTGGACCTTTCCGGTGAAAGGTCAGAAGTGAGAAAGCAGATAGTGAAAGCGTGCGAAGAGTACGGATTCTTCAAGGCAATAAACCACGGAATAAGCGAAGAGGTTATAACGAAAACAGAAGAAGCAGGGTTTAGGTTCTTCGCGAAACCGGTGGCGCAGAAGAAAGTGGCAGCACCAGCATATGGGTGGAAGAACATAGGGTTGAATGGGGACATGGGTGAAGTGGAGTATCTTCTCCTCACAGCTCCAACCACTCACTCCATTGCTCAGATATCCAAAACCACTCACCCATTTAACGACGTCAGGTGTAGGTTGAGTGCATACACTGAAGCAGTCAGGGAGCTGGCATGTGAGATATTGGAGCTTATAGCAGAGGGATTGGGGGTCCCGGACACTTGGGCATTCAGCAGGTTGATTAGGGATCTTGACAGTGACTCAGTTCTCAGGCTCAATCACTATCCACCTATCAAGAACAAAGATAATATTATTGGATTTGGAGAGCATTCTGACCCTCAGATCATTACCCTTCTTAGATCAAACGACGTTCCTGGCCTCCAAATCTCTCTTCAACGTCAACATGGGGTTTGGATCCCAATTACCCCTGACCCCTCTGCTTTCTATGTCAACGTCGGTGATGTACTACAGGTGATGACAAATGGGCGATTTGTGAGCGTGAGACACAGGGCTATGACGAACTCAAAGAAGTCTAGAATGTCAGTTGCATATTTTGGGGCTCCACCACTGCATGCTACGATTGTTGCTCCCTCAGTTATGGTCACTCCCCAGAGGCCCTCTCTCTTCCGACCATTCACTTGGGCCGATTACAAGAAAGCCACTTACTCTCTCAGGCTTGGAGACACACGCATTCAGCTTTTCAGAACAACCCCTCACCAGGATTAA 1011 0.4649 MVLASPRPKAIIIRSEEEEDENKNNNDNNNEVVVIPVVDLSGERSEVRKQIVKACEEYGFFKAINHGISEEVITKTEEAGFRFFAKPVAQKKVAAPAYGWKNIGLNGDMGEVEYLLLTAPTTHSIAQISKTTHPFNDVRCRLSAYTEAVRELACEILELIAEGLGVPDTWAFSRLIRDLDSDSVLRLNHYPPIKNKDNIIGFGEHSDPQIITLLRSNDVPGLQISLQRQHGVWIPITPDPSAFYVNVGDVLQVMTNGRFVSVRHRAMTNSKKSRMSVAYFGAPPLHATIVAPSVMVTPQRPSLFRPFTWADYKKATYSLRLGDTRIQLFRTTPHQD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2279 336 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 180 283 IPR005123 -
Aed6g2279 336 Pfam non-haem dioxygenase in morphine synthesis N-terminal 35 94 IPR026992 -
Aed6g2279 336 PANTHER PLANT GIBBERELLIN 2-OXIDASE 32 331 - -
Aed6g2279 336 SUPERFAMILY Clavaminate synthase-like 30 323 - -
Aed6g2279 336 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 32 331 - -
Aed6g2279 336 Pfam 2OG-Fe(II) oxygenase superfamily 182 281 IPR044861 -
Aed6g2279 336 Gene3D - 4 320 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2279 Aed-Chr6 24898866 24902316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2279 35 330 Glycosyltransferase AT5G59530 27.358 1.33e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2279 K04125 - gmx:100816206 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2279 6 24898866 24902316 Aed6g2279 6 24898866 24902316 ECH