Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2219 ATGGGAATATATACACGTACCAACCATACTTTGTTTTTTCGTGGACCGCATTCACCACCTTCACGATTGTTCATTCTCCTTCTTTCTTCTACGGCACCTCGTCCTTCTAACCCCAACCAACCTGTTTTACCGTTTTCGACAACTTCTTCCTTAATCACATCCAACACTCCTGTCATGGACAAACTTAACGCCGTGCACGATAGAGATCACAAATTTTTAAGCAAAGCTGTTGAAGAAGCATATAAAGGGGTAGATTGTAAAGATGGAGGCCCTTTTGGTGCTGTGATAGTTCGTAATGATGAAATAGTTGCTAGTTGTCACAACATGGTTCTGTGTAACACAGACCCAACTGCTCATGCTGAGGTCACAGCAATAAGAGAGGCTTGTAAGAAGCTTAAGCAGATAGAACTTGCAGATTGTGACATATATACCTCTTGTGAACCTTGCCCCATGTGCTTTGGTGCAATCCACCTTTCTCGAATTAAGAGGTTGGTTTACGGAGCGAAGGCTGAGGCAGCAATTGCTATTGGGTTTGATGATTTTATTGCTGATGCATTGCGAGGTACTGGATTCTATCAAAAGGCAACATTGGAAATTAAAAGAGCTGATGGCAATGAGGCCATCATTGCTGAAGAGGTTTTTGAGAAAACAAAGGAAAAATTCCGAATGTATTAG 675 0.4178 MGIYTRTNHTLFFRGPHSPPSRLFILLLSSTAPRPSNPNQPVLPFSTTSSLITSNTPVMDKLNAVHDRDHKFLSKAVEEAYKGVDCKDGGPFGAVIVRNDEIVASCHNMVLCNTDPTAHAEVTAIREACKKLKQIELADCDIYTSCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAIIAEEVFEKTKEKFRMY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2219 224 Gene3D Cytidine Deaminase, domain 2 68 223 - -
Aed6g2219 224 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 119 156 IPR016192 GO:0008270|GO:0016787
Aed6g2219 224 CDD nucleoside_deaminase 73 180 - -
Aed6g2219 224 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 61 223 - -
Aed6g2219 224 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 61 223 - -
Aed6g2219 224 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 67 181 IPR002125 -
Aed6g2219 224 SUPERFAMILY Cytidine deaminase-like 63 182 IPR016193 GO:0003824
Aed6g2219 224 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 68 167 IPR002125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2219 Aed-Chr6 24389863 24392773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2219 - - gmx:100820230 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2219 6 24389863 24392773 Aed4g1027 4 9394278 9397806 PCT