Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2170 ATGTTGGGGAAGAGGCCCCGGCCAATGATCGGAAAGTTGTCGGAGTTGCTGGTCTCAAGAGGCCGTGCGCTGGCACTTTTGGACACAAGCACCACCATAAGCAGCAGCCCAAGAGACATGAAGACGATGATGCAATCACCAAGTCCAAGAGGCTTAAAGAACTATGATCTCGGTGGTGTTGGTCTTGGAATTGTGGTGGCTCTTGATAGTAAATCAAACGAGCCTGCTGCCCGTCATACCGTTTGCACCTCCAATTTGAATTTGCACCGATCTGGCCCAGTCCCGGTTTACTATGCCAAAAACAACAACCCAGCAGTTGATGATGATTTTGATGTGGAGGAATACACCTATGTCACCTGCTACGTTCCTAACAAAACATTCACTAAGGTATACTATGATGGCGGTGAAGGTGAAATTCGGAGACATAACAACAACAACGTTGGAGTTCTCAAAAGAACCATACCACAACCTTTGATTGAGGCCGAATCATCATCATTATATCCCACATCGAATTTTCTTAGTTCATGCCACTTATGCGGAAAGAAACTCCACGGCAAAGACATATACATGTACAGAGGAGAAAAAGCCTTTTGTAGCACAGAGTGTCGTTCCAGTCAAATAATGATGGACGAGAGGAAGGAACGTTGTAGGTCAGAGGCTTCAAGGTCTGTGGAAATGTCAAGTTCACCATACACAAGGGAACAGATATTTTCAACTGGGATTCTTGCGCTTTAG 735 0.4544 MLGKRPRPMIGKLSELLVSRGRALALLDTSTTISSSPRDMKTMMQSPSPRGLKNYDLGGVGLGIVVALDSKSNEPAARHTVCTSNLNLHRSGPVPVYYAKNNNPAVDDDFDVEEYTYVTCYVPNKTFTKVYYDGGEGEIRRHNNNNVGVLKRTIPQPLIEAESSSLYPTSNFLSSCHLCGKKLHGKDIYMYRGEKAFCSTECRSSQIMMDERKERCRSEASRSVEMSSSPYTREQIFSTGILAL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2170 244 Pfam zinc-finger of the FCS-type, C2-C2 163 213 IPR007650 -
Aed6g2170 244 ProSiteProfiles Zinc finger FLZ-type profile. 171 214 IPR007650 -
Aed6g2170 244 PANTHER FCS-LIKE ZINC FINGER 12 1 243 - -
Aed6g2170 244 PANTHER OS02G0174800 PROTEIN 1 243 IPR044604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2170 Aed-Chr6 24022015 24023504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2170 - - gmx:100816402 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2170 6 24022015 24023504 Aed6g2170 6 24022015 24023504 ECH
Aed6g2170 6 24022015 24023504 Aed4g0976 4 8924561 8926910 PCT