Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2141 ATGCTGTGTCTGAGAACGGCGTCGTCACATCCGTTATCTCTGAGTTTATCGGCCACGAAACACCTCCAGGCGCGGTGGGCGTTGAGATCTAGCATAAAGATGGCGTCAAGTAAAACGGTGGAGCACATAGTTCTGTTCAAGGTGAAAGAGGAAACGGAGGCATCGAAAGTGAGTGAGATGGTAAACGGGCTGGGCTCGCTGGTGTCGCTGGACCCGGTGCTCCACCTGAGCGTGGGCCCACTCCTCCGCAGCCGATCCTCCTCTCTAACCTTCACTCACATGCTCCACACTCGCTACAAGTCCAAGGAGGATCTCGAAGCATATTCCGCACATCCTAGCCACGTCAGCGTCGTCAAGGGGAACATCCTCCCCATCATCGACGACATCATGGCCGTCGATTGGATTGCCGACGACCTCGGCGCCAACCTCGTTCCGCCACCCGGTTCCGCTGTTCGGGTCAGCTTCTTGAAATTGAAGGAGGACGCTGATAAGGATAAGGTGTTGGGTGTGGTCAGAGGAATTCCCGAGAGTTTCAAGCAGATTAGCGAGTTCAGTTTCGGGGAGAATTTCTCGCCGGGGAGAGCCAAGGGTTTCTCGATTGCTTCGCTCGCGGTTTTTCCCGGACCGAGGGAGCTGGAGGCGGTGGATTCTAACGAGGAGTTGGTGAATTTCCAGAAGGATAAGGTTAGGGATCAAATCGAGAGTGCAGTCGTCGTTGATTATGTGGTGCCGTCACCTCCGAGTGCTCAGAGCGCGAGCCTTTGA 765 0.5529 MLCLRTASSHPLSLSLSATKHLQARWALRSSIKMASSKTVEHIVLFKVKEETEASKVSEMVNGLGSLVSLDPVLHLSVGPLLRSRSSSLTFTHMLHTRYKSKEDLEAYSAHPSHVSVVKGNILPIIDDIMAVDWIADDLGANLVPPPGSAVRVSFLKLKEDADKDKVLGVVRGIPESFKQISEFSFGENFSPGRAKGFSIASLAVFPGPRELEAVDSNEELVNFQKDKVRDQIESAVVVDYVVPSPPSAQSASL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2141 254 Gene3D - 31 137 - -
Aed6g2141 254 Gene3D - 150 250 - -
Aed6g2141 254 ProSiteProfiles Stress-response A/B barrel domain profile. 150 241 IPR013097 -
Aed6g2141 254 PANTHER - 28 249 IPR044662 -
Aed6g2141 254 SUPERFAMILY Dimeric alpha+beta barrel 149 245 IPR011008 -
Aed6g2141 254 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3 28 249 - -
Aed6g2141 254 SUPERFAMILY Dimeric alpha+beta barrel 38 139 IPR011008 -
Aed6g2141 254 SMART Dabb_2 40 136 IPR013097 -
Aed6g2141 254 SMART Dabb_2 150 243 IPR013097 -
Aed6g2141 254 ProSiteProfiles Stress-response A/B barrel domain profile. 40 134 IPR013097 -
Aed6g2141 254 Pfam Stress responsive A/B Barrel Domain 40 135 IPR013097 -
Aed6g2141 254 Pfam Stress responsive A/B Barrel Domain 152 243 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2141 Aed-Chr6 23819526 23820290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2141 - - gmx:100527770 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2141 6 23819526 23820290 Aed4g0943 4 8615282 8616034 PCT