Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1854 ATGTCAATGTCAAACCCCTCTTTCTTCCTTCTCCTCTTTCTCTTTCTCTTTTCCGCTTCTGCAACAACCCTCTCTCGTTTCAACTCTCTACGTGCACCTTCAGATGTCGTTGAAATTGTTGGTGAGAAACAGCATGAGAACGTTGCGGCGTGGAAGACGAGGAGATCAGTATTGGCGGAAGGTGCAGGTGCGAAGAAGAATACGACTCTGGTGCTTGCTAAGGAAAGAACTCGCCGTAAAGATTTGTTTAACGGTTTTCAACGTTACACCGGTGGTTGGAATATCAGCAATGCCTATTACCTCTCGTCAGTTGTGTCAACTGCGATTCCTTTTCTTTCCGTGGCTGTAGCTTGGTTCGTGATTTTTGGAATTTTTTTACTCATCATCTGTGCGTGTTGCTGCTGTTGTAACGGAGGAGAGAAAAGTGATGATGACGACTATTCTAAAGAATTCCATCAATTCTGCCTCGCCTTGCTTATTCTCTTCACAATTGCAGCAATATGTGGATGCGCTGTGCTGTACTCTGGTCAGGGGAAGTTTCGTGAAAGCACTTCGGACACACTTGATTACGTTGTGAATCAGGCTGAATTCGTAGCTGAAAACCTCAGGAACGTGACAAGTTACTTTGATTCAGCTAAGCAGCTTGTGAGTGGGATTCCTCTGCCAATAAATCTTGGAACCAACATTGATGATGTCAAAGGGAAAGTCATCACTGCTGCTGATTCTCTCTCCAAGAAGGCTAAAGATAATTCAAGGATGATACACAAAGTCATAGATGCAGTGAGACTGGCTCTTGTTATTGTTGCCGCTGTTATGATCTTTGTTGCATTTCTTGGATTGTTATTTTCTTTACTTGCTTTGCCGTGTCCTGTATACTCCTTGGTAGTTATTGGATGGATTCTTGTCACCGGCACCTTGTTACTTTGTGCTGCATTTTTTTTTGTTCATAATGTGACTGCGGATACATGCGTAGCGATGGATGAGTGGGTTGTGAACCCGACAGCACACACTGCCTTGGATGACATTCTTCCATGCGTGGAGAATGCAACCGCGGTGGAAACCCTATTACGATGCAAGAGCCTCACATATACGATAGTTGACTTATTTGACCATATAATTTCGAATTACACAAACGGAAATGCCGTAGCAAATTTCAATCAATCAGGTCCACTCGTGCCTCTTCTCTGCAATCCATACAATAACGACTTGACATCTCGCAACTGTGCGCCAGGGGAAGTTTCATTCAATAACGCCACCCAGGTGTGGAAGAATTATACGTGCGAGGTTTCTTCGTCTGATCAATGCACGAGTGAAGGTCGTTTGACACCGACGATATACAGGAAACTGGCGGCTGCAGTCAACGTGACGGATGGTTTGTTTCGTTATGGGCCATTTTTCGTTGATTTAGTAGATTGCACATTTGCCCGTAAAGCGTTCGCAGTAATAAGCACCAATTATTGTCCTTCACTGAGGAGATACACTCGAAGGGTTTATATGGGAACGGTTGTGGTATCTGCCGCCGTAATGCTCTCCTTGGTATTTTGGATCGTTTTTGTCAGAGACCAGTTGCGACGTCTTCAAAACCATGGTGATTAG 1596 0.4436 MSMSNPSFFLLLFLFLFSASATTLSRFNSLRAPSDVVEIVGEKQHENVAAWKTRRSVLAEGAGAKKNTTLVLAKERTRRKDLFNGFQRYTGGWNISNAYYLSSVVSTAIPFLSVAVAWFVIFGIFLLIICACCCCCNGGEKSDDDDYSKEFHQFCLALLILFTIAAICGCAVLYSGQGKFRESTSDTLDYVVNQAEFVAENLRNVTSYFDSAKQLVSGIPLPINLGTNIDDVKGKVITAADSLSKKAKDNSRMIHKVIDAVRLALVIVAAVMIFVAFLGLLFSLLALPCPVYSLVVIGWILVTGTLLLCAAFFFVHNVTADTCVAMDEWVVNPTAHTALDDILPCVENATAVETLLRCKSLTYTIVDLFDHIISNYTNGNAVANFNQSGPLVPLLCNPYNNDLTSRNCAPGEVSFNNATQVWKNYTCEVSSSDQCTSEGRLTPTIYRKLAAAVNVTDGLFRYGPFFVDLVDCTFARKAFAVISTNYCPSLRRYTRRVYMGTVVVSAAVMLSLVFWIVFVRDQLRRLQNHGD 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1854 531 PANTHER TRANSMEMBRANE PROTEIN 13 528 - -
Aed6g1854 531 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 13 528 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1854 Aed-Chr6 21778192 21781485 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1854 - - gmx:100809538 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1854 6 21778192 21781485 Aed2g0103 2 730388 733577 ECH
Aed6g1854 6 21778192 21781485 Aed4g1771 4 22018699 22023854 ECH
Aed6g1854 6 21778192 21781485 Aed6g1854 6 21778192 21781485 ECH
Aed6g1854 6 21778192 21781485 Aed4g1121 4 10566977 10572758 PCT