Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1708 ATGGGTAGTGGAGTTCTCGAAACGAATCGTTTCACAAATGGGGAAGCCGAGAACAGTCTTCACAAGCAAGCTCCTGCTGCATGCGACAACTCGCTTTCTGATGCCACCAATGATGCAGTTGCTGACCCTGATGTTCCTGCGAAGAGGGCTAGGCTGCAGAAGGATTTGACCTTTCAGGACATGTATCAAAATGATGGCGTGTTTGACGAAGACGAAGAAGATGACAGTGATTGGGAGCCGTTTCAGTTACACAAGTGTGTGGAATTTGAAATCAAAAAGTGGTTTTGCAAAAATTGTACTATGACTAACCTCGATCACGATGTCTGCTGCTATATATGTGGGGAGCATAGGGATTCTAAAATCCTTAGCCATGGGTTTTTTGCATCTCCTTTAGCTCAAGACGAGGATCTGACTGAAGTCCAGGGAATCGTAAAGGGACTGAAAGATGTTGGCTCACAGGAATCAATGGCAAATAGTTCTACAGCAATCGGCTTTGATGAGAGAATGTTGTTACATGCAGAAGTTGAAAAAAAATCAACTCTGCATCCTGAGAGGCCAGATCGTCTTCAAGCCATTGCTGCTAGTCTTGCCAGAGCTGGCATATTTCCTGGAAAATGCTATTCAATTCCTGCTAGAGAAATCACACCAGAAGAACTTGTTACGGTTCATTCCTTGGAGCATATTGAATCTGTGGAGGTTACAAGCGAATCATTTTCTAGTTATTTTACTTCTGACACATATGCCAATCAGCATTCCGCACTTGCTGCTAGGTTGGCAGCTGGGTTTTGTGCTGATCTAGCATCCACAATTGTTTCTGGCCGAGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAAAACATGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTGGCAGCATTGGCAGCTCAAGCTGCGGGGGCTAGGAAGGTGTTAATTTTGGATTGGGATGTTCATCATGGAAATGGGACACAAGAAATATTTGAACAAAATAAATCAGTCTTGTATATTTCATTGCATAGACATGAGGGAGGAAAGTTTTATCCTGGTACTGGCGCTGCTGAAGAGGTTGGTAGTATGGGTGCAGAAGGATACTGTGTGAATATTCCATGGAGTCGAGGAGGAGTTGGTGACAATGACTATATTTTTGCATTTCAGCATGTTGTCCTTCCTATAGCTTCTGAGTTTAATCCAGATTTTACCATAGTATCTGCTGGATTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGTGATATTACTCCCTCTGGCTATGCATATATGACGCGTATGTTGAATGCCCTTTCTGGTGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCTATATCTTCTTCTGCAACTGAAGTAATCAAGGTATTACTGGGTGAAAGTCCTGGATGTGAACTGGAAAATTGTTTCCCTTCCAAAGCTGGCCTGCAAACTGTTCTGGAAGTCCTCAAAATTCAGATGAACTTTTGGCCTTCCTTGGGTCCCATTTTTGTGAATTTGGAGTCACAATGGAGGATGTACTGTTTTGAAAAAAAGAGGAAACAGATTAAGAAACGACGCCGAGTTGTGGTTCCAATGTGTTGGAAGTGGGGACGAAAAAGTTTGTTGTTCCATTTTCTCAACGGCCACCTTAATGTAAAATCAAAGTAA 1692 0.4303 MGSGVLETNRFTNGEAENSLHKQAPAACDNSLSDATNDAVADPDVPAKRARLQKDLTFQDMYQNDGVFDEDEEDDSDWEPFQLHKCVEFEIKKWFCKNCTMTNLDHDVCCYICGEHRDSKILSHGFFASPLAQDEDLTEVQGIVKGLKDVGSQESMANSSTAIGFDERMLLHAEVEKKSTLHPERPDRLQAIAASLARAGIFPGKCYSIPAREITPEELVTVHSLEHIESVEVTSESFSSYFTSDTYANQHSALAARLAAGFCADLASTIVSGRAKNGFALVRPPGHHAGVKHAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGKFYPGTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDYIFAFQHVVLPIASEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAYMTRMLNALSGGKLLVILEGGYNLRSISSSATEVIKVLLGESPGCELENCFPSKAGLQTVLEVLKIQMNFWPSLGPIFVNLESQWRMYCFEKKRKQIKKRRRVVVPMCWKWGRKSLLFHFLNGHLNVKSK 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1708 563 ProSitePatterns Zinc finger RanBP2-type signature. 94 113 IPR001876 -
Aed6g1708 563 PANTHER HISTONE DEACETYLASE-RELATED 29 562 - -
Aed6g1708 563 Pfam Histone deacetylase domain 182 470 IPR023801 -
Aed6g1708 563 MobiDBLite consensus disorder prediction 1 37 - -
Aed6g1708 563 CDD HDAC_classII 182 472 - -
Aed6g1708 563 SUPERFAMILY Arginase/deacetylase 158 505 IPR023696 -
Aed6g1708 563 Gene3D Histone deacetylase domain 158 509 IPR037138 -
Aed6g1708 563 PANTHER HISTONE DEACETYLASE 29 562 - -
Aed6g1708 563 MobiDBLite consensus disorder prediction 1 44 - -
Aed6g1708 563 PRINTS Histone deacetylase superfamily signature 284 307 IPR000286 -
Aed6g1708 563 PRINTS Histone deacetylase superfamily signature 405 415 IPR000286 -
Aed6g1708 563 PRINTS Histone deacetylase superfamily signature 317 332 IPR000286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1708 Aed-Chr6 20739587 20747413 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1708 - - gmx:100804724 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1708 6 20739587 20747413 Aed6g1708 6 20739587 20747413 ECH