Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1672 CTAAGGCCCATAGAAATACCTAAGACAGAGGAATCGGATTCTGAACATCTGCTTTTTCTCTCCGTCGTGGTTGCACTCACTCACTCACTCCGAGACCAAAACGGCGCCATGCCTACCGTGAGTGTGGGGCGGGATCGCCTGTTTGCGGCCATAGGAAAAACTTACACGCAAGAGGAATTCGAGGACTTGTGCTTCAGTTTCGGGATCGAGCTCGACGACGTCACGACGGAGAAGGCAATTGTGAGAAAAGAGAAGCATTTGGATGAAGAAGAAGCTGACGAGGATGAAGAGGTTATCTACAAAATCGAAGTTCCCGCCAACAGATATGACCTCTTGTGCCTTGAAGGGCTCGCTCAAGCCCTCCGAGTTTTCTGTGAGTTCCAGGAGATTCCCACTTACAGATTGTCTAACATTAGTAAGGATGCAATGCTGAAAATGCATGTGAAGCCAGAGACTTCTCTGATTCGTCCATATGTTGTATGTGCGGTATTAAGAGGTATAAATTTTGATAAAGTAAGATACAACAGCTTTATTGATCTCCAAGACAAGCTTCACCAAAACATATGTCGCCGAAGAACTCTTGTTGCCATTGGAACTCATGATCTGGATAAATTGGAGGGCCCTTTCACCTATGAGGCTTTGCCACCTTTGAGTATAACTTTTACGCCCCTAAAGCAGGAAAGAAACTTCAGGGCTGATGAGCTAATGGAGTTCTACAAATCAGATATGAAACTGAAGAAATTCTTGCATATAATTGAGGATTCCCCTGTTTTCCCTGTTCTATATGACAGTAAAAGAACTGTGTTATCTTTACCCCCAATTATTAATGGTGCACATTCGGCCATCACTCTGGAGACAAAGAATGTATTTATTGAATGTACTGCAACTGATCTGACAAAAGCGAAGATTGTTTTAAATACAATGGTAGCAACCTTCTCAGAGTATTGTGAAAAGAAATTTGTCATTGAACCCGTTGAAGTGATTTCTTCTGATGGCAAGTCAAACATATACCCTGATTTATCTGTCTACAATATGGAAGTTTCTCTATCTTACATTACTGGATTGATTGGGGTATCATTGGAGGCAGAAAAGGTCACTAAGTTCTTAAATCGGATGCAATTGCATGCCAAGCAGTCTACATCTGATAATAAGCAGTGTAACTTTGTGGTATCTGTACCTCCTACGAGAAGTGATGTTCTTCACCCATGTGATGTTATGGAGGATGTGGCAATTGCTTATGGTTTCAATGCTATTAAGGATAAAGCAGTAGTAGATAATAAGGGCTCGAAGAGGTTGGCTGCTTCCTTGACTCTACTTCCTCTGAATGAGCTCAGTGATCTCATCAGAAAAGAGGTTGCATTGATTGGGTTCACAGAGGTCTTGACATTTATACTCTGCTCTAAAAAGGAAAACTTTGCCATGCTTAACCGTAAAGATGATAAATCTACAGCAGTTATCATTGGAAACCCTAGGTCTTCAGACTTTGAGGTTCACACACTTTATCTTCCTTTATCTATGACAATGTTAAGTTTTGCTGTGCGGACTAGTCTTATGCCTGGCATTTTGAAAACTGTTGCTCACAACAAGGATCATCCAAAGCCCATAAAGATTTTTGAAGTGGGTGATATAGCAGTTTTGGATGACAACAAAGATGTTGGTGCAAAAAATCTTCGCCAACTCGCTGCTCTGTATTGTGGTGCTAATGCTGGATTTGAGATAATTCATGGCCTGGTTGACAGAGTATTGGAAAAGAATGGGGTTCCCTTTGTTTCACCTGGTGATAAGTCGGGTTATTATATTGAGCGGTCAGATGAACCTGAATTTCTTGCCGGTAGACAAGCTAGAATCATTTACAAGGGAAAGCATATTGGCACTTTTGGCATTGTTCATCCAGAGGTATTAAACAACTTTGACATTCCCGATCCCTGCTCCTTTGTTGAACTTAACATCGAAAGTTTCCTATAG 1965 0.4142 LRPIEIPKTEESDSEHLLFLSVVVALTHSLRDQNGAMPTVSVGRDRLFAAIGKTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLDEEEADEDEEVIYKIEVPANRYDLLCLEGLAQALRVFCEFQEIPTYRLSNISKDAMLKMHVKPETSLIRPYVVCAVLRGINFDKVRYNSFIDLQDKLHQNICRRRTLVAIGTHDLDKLEGPFTYEALPPLSITFTPLKQERNFRADELMEFYKSDMKLKKFLHIIEDSPVFPVLYDSKRTVLSLPPIINGAHSAITLETKNVFIECTATDLTKAKIVLNTMVATFSEYCEKKFVIEPVEVISSDGKSNIYPDLSVYNMEVSLSYITGLIGVSLEAEKVTKFLNRMQLHAKQSTSDNKQCNFVVSVPPTRSDVLHPCDVMEDVAIAYGFNAIKDKAVVDNKGSKRLAASLTLLPLNELSDLIRKEVALIGFTEVLTFILCSKKENFAMLNRKDDKSTAVIIGNPRSSDFEVHTLYLPLSMTMLSFAVRTSLMPGILKTVAHNKDHPKPIKIFEVGDIAVLDDNKDVGAKNLRQLAALYCGANAGFEIIHGLVDRVLEKNGVPFVSPGDKSGYYIERSDEPEFLAGRQARIIYKGKHIGTFGIVHPEVLNNFDIPDPCSFVELNIESFL 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1672 654 SUPERFAMILY Class II aaRS and biotin synthetases 412 653 IPR045864 -
Aed6g1672 654 Gene3D - 343 418 - -
Aed6g1672 654 Gene3D - 136 341 IPR020825 -
Aed6g1672 654 Pfam tRNA synthetase B5 domain 345 415 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Aed6g1672 654 SUPERFAMILY PheT/TilS domain 147 317 - -
Aed6g1672 654 Pfam Phenylalanyl tRNA synthetase beta chain CLM domain 440 650 IPR041616 -
Aed6g1672 654 CDD PheRS_beta_core 440 653 IPR041616 -
Aed6g1672 654 Pfam B3/4 domain 156 317 IPR005146 GO:0003723|GO:0004826
Aed6g1672 654 SUPERFAMILY Putative DNA-binding domain 41 131 IPR009061 -
Aed6g1672 654 Pfam Phe-tRNA synthetase beta subunit B1 domain 37 125 IPR040659 -
Aed6g1672 654 Gene3D - 37 125 - -
Aed6g1672 654 ProSiteProfiles B5 domain profile. 340 420 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Aed6g1672 654 SMART B5_2 342 415 IPR005147 GO:0000287|GO:0003723|GO:0005524|GO:0006432
Aed6g1672 654 SMART B3_4_2 155 317 IPR005146 GO:0003723|GO:0004826
Aed6g1672 654 PANTHER PHENYLALANINE--TRNA LIGASE BETA SUBUNIT 37 654 - -
Aed6g1672 654 SUPERFAMILY Putative DNA-binding domain 344 419 IPR009061 -
Aed6g1672 654 TIGRFAM pheT_arch: phenylalanine--tRNA ligase, beta subunit 37 654 IPR004531 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Aed6g1672 654 Gene3D Bira Bifunctional Protein; Domain 2 439 654 IPR045864 -
Aed6g1672 654 PANTHER PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 37 654 IPR045060 GO:0004826|GO:0006432
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1672 Aed-Chr6 20498039 20507083 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1672 K01890 - gmx:100805249 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1672 6 20498039 20507083 Aed6g1672 6 20498039 20507083 ECH