Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1653 ATGGGTTGGGCCATAGCTCTACACGGAGGCGCCGGCGACATCCCGCTCTCACTACCACCGGAGCGCCGGCAGCCGCGCGAGGAGGCTCTCCGCCACTGCCTCCAAATCGGCGTGGAAGCTCTCAAAGCCAAACTGTCTCCTCTTGACGTGGTTGAACGGGTCGTTCGGGAGTTGGAGAACATTCCGCAGTTTAACGCGGGAAGAGGATCTGTGTTGACTTCGGAAGGTACCGTGGAAATGGAAGCTTCCATAATGGACGGCGCCACTATGAATTGCGGAGCTGTTTCGGGCCTCACCACGGTGGTCAACGCCATCTCTCTCGCTCGTTTGGTCATGGAAAACACGCCTCACATCTATCTCGCTTTTCATGGTGCAGAGCAATTCGCAAGACAACAAGGCGTTGAGACTGTGGATTCAACCCATTTTATCACTCCCGAAAATATTGAAAGGCTAATCCAGGCAAAACAAGCCAACAGGGTCCAGATTGATTATACCCAACCTATCCAAAATGATAGTAAGAAAGAGATGCCATTGGCTAATGATGGTGATAGTCAAATTGGGACTGTTGGGTGTGTGGCTGTGGATGGTCTTGGGAATTTGGCTTCTGCAACATCTACTGGTGGATTAGTGAACAAAATGGTGGGTAGAATTGGTGACACACCAGTCATTGGTGCTGGAACCTATGCCGATGCACGCTGCGCGGTTTCAGCAACGGGCAAAGGTGAAGCAATAATACGTGGGACAGTGGCAAGAGATGTGGCTGCTCTGATTGAGTTCAAGGGTCTTTCTCTAGAGGAAGCTGCTCATTCTGTTGTACATGAGCGCACACCAGAAGGCACTGTTGGTTTGGTTGCTGTGTCTGCCAAAGGAGAAGTTGCAATGCCTTTTAATACAACAGGCATGTTCAGAGCATCTGCTACTGAAGATGGCCATTCTGAGATTGCAATTTGGCCTGCTGCCAGCCAAAATTGA 972 0.5072 MGWAIALHGGAGDIPLSLPPERRQPREEALRHCLQIGVEALKAKLSPLDVVERVVRELENIPQFNAGRGSVLTSEGTVEMEASIMDGATMNCGAVSGLTTVVNAISLARLVMENTPHIYLAFHGAEQFARQQGVETVDSTHFITPENIERLIQAKQANRVQIDYTQPIQNDSKKEMPLANDGDSQIGTVGCVAVDGLGNLASATSTGGLVNKMVGRIGDTPVIGAGTYADARCAVSATGKGEAIIRGTVARDVAALIEFKGLSLEEAAHSVVHERTPEGTVGLVAVSAKGEVAMPFNTTGMFRASATEDGHSEIAIWPAASQN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1653 323 CDD Asparaginase_2 4 310 - -
Aed6g1653 323 Pfam Asparaginase 3 317 IPR000246 GO:0016787
Aed6g1653 323 Gene3D (Glycosyl)asparaginase 188 320 - -
Aed6g1653 323 PANTHER L-ASPARAGINASE 1 317 IPR000246 GO:0016787
Aed6g1653 323 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 317 - -
Aed6g1653 323 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 317 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1653 Aed-Chr6 20377993 20379918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1653 5 295 Miscellaneous Gene Families AT4G00590 25.688 8.31e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1653 K13051 - gmx:100799400 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1653 6 20377993 20379918 Aed6g1653 6 20377993 20379918 ECH