Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1652 ATGCGACGACGGGCTGCCGAGTATCGGCGCCCGGTACGACGGAGGTTTTCATATTGGATCTGGCTTCTCCTCGCTTTCTCCTCCATCCTCGGATTGCTCCTCTTCCTTCTCCAACACCAAGATCCGCTTCATCATCCTTTGCCTGAGACAAATGCAAGAATTGAACAATTTGCTAAGGAGAGTTTGAATTTTACTGAAGAGATTTTAAGTGTAAAATCATTTTCACGGCAGTTAGCAGAACAAATGATTCTGGCCAAGGCTTATGTGGTTATTGCCAAAGAACACAACAATCTTCACCTTGCCTGGCAGCTTAGCTCAAAGATCAGAAGTTGCCAGCTTTTGCTTTCAAAAGCTGCCATGACTGGTGAGCCCATCACATTGGAGGAAGCAGAGCCAATTATTAAAAGCCTTTCTTTTCTAATGTTTAAGGCACAAGATATCCATTATGACATTGCAACCACAATAGTGACTATGAAATCACATATTCAAGCTCTCGAAGAGCGTGCCAATGCAGCAATAGTTCAAAGCACCGTGTTTGGTCAAATAGCAGCTGAAGCAGTACCTAAGAGTCTTCATTGCCTAAATGTGAAACTCATGTCTGATTGGATAAAGATGCCATCCCTGCAAGAATCCTCAGATGAAAGGAAAAACTCCCCCCGGCTTGTGGACAACAATCTATATCATTTCTGCATATTTTCAGATAATGTACTCGCAACATCTGTAGTTGTAAACTCAACTGTCTCCAATGCTGACCATCCAAAGCAGTTGGTCTTTCACATTGTCACTAATGGAGTCAATTATGGGGCAATGCAAGCATGGTTCCCAAATAATGACTTTAAAGGAGCCACCATAGAGGTACAGAACATTGAGGAGTTTCATTGGTTGAATGCATCTTATTCTCCTCTTGTCCAGCAGCTCCTAAATCCTGACTCACAAACCTTCTATTTTGGAGCATATCAAGATTTAAATGTTGAACCCAAGATGCGGAATCCCAAGTATTTGTCTTTATTGAACCATCTTCGGTTTTACATCCCTGAGATTTATCCACAACTTGAGAAGGTGGTCTTCCTGGATGATGACCTTGTTGTCCAGAAGGATCTGACCCCTCTTTTCTCTCTGGATTTGCATGGGAATGTGAATGGTGCAGTTGAAACTTGTCTTGAAGCATTTCATCGTTACTACAAGTATCTCAATTTCTCAAGCTCAATTATTAGCTCAAGGTTTGATCCGCAGGCATGTGCATGGGCATTTGGTATGAACATTTTTGACTTGGTTGCATGGCGGAAGGCAAATGTGACTGCAAGATATCACTATTGGCAAGAGCAGAATGCTGATGGGACACTCTGGAAGCTGGGGACACTTCCTCCTGCTCTTCTTTGTTTTTATGGTTTGACAGAGCCACTCGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAACATTGACAACCGACTCATTGAAAGTGCAGCAGTTATTCACTTCAATGGGAACATGAAGCCATGGTTGAAGTTAGCTATAGGAAGGTATAAGCCACTATGGGACAAGTACATAAATCAAAGTCACCCTCATCTTCAAGATTGTGTCCCAAGTTGA 1599 0.4246 MRRRAAEYRRPVRRRFSYWIWLLLAFSSILGLLLFLLQHQDPLHHPLPETNARIEQFAKESLNFTEEILSVKSFSRQLAEQMILAKAYVVIAKEHNNLHLAWQLSSKIRSCQLLLSKAAMTGEPITLEEAEPIIKSLSFLMFKAQDIHYDIATTIVTMKSHIQALEERANAAIVQSTVFGQIAAEAVPKSLHCLNVKLMSDWIKMPSLQESSDERKNSPRLVDNNLYHFCIFSDNVLATSVVVNSTVSNADHPKQLVFHIVTNGVNYGAMQAWFPNNDFKGATIEVQNIEEFHWLNASYSPLVQQLLNPDSQTFYFGAYQDLNVEPKMRNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDLVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSSSIISSRFDPQACAWAFGMNIFDLVAWRKANVTARYHYWQEQNADGTLWKLGTLPPALLCFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWDKYINQSHPHLQDCVPS 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1652 532 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 529 IPR029044 -
Aed6g1652 532 CDD GT8_like_1 227 520 - -
Aed6g1652 532 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 532 IPR029993 GO:0047262
Aed6g1652 532 Pfam Glycosyl transferase family 8 231 506 IPR002495 GO:0016757
Aed6g1652 532 PANTHER HEXOSYLTRANSFERASE 3 532 - -
Aed6g1652 532 SUPERFAMILY Nucleotide-diphospho-sugar transferases 227 530 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1652 Aed-Chr6 20373690 20376722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1652 1 529 Glycosyltransferase AT2G20810 55.597 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1652 K13648 - gmx:100805886 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1652 6 20373690 20376722 Aed6g1652 6 20373690 20376722 ECH