Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1641 ATGCGGTGGGAAAAGGTTGAGGTGAAGGCGATAGGCACCACCACAGAGGGTGGAGGTGGTGTAAGTGAGGTGTATGGCCCCGGCAAGAGGTGGGGTCACACCTGCAACGCCGTCAAAGGTGGCAGACTCGTCTATGTCTTCGGTGGTTACGGCAAAGATAACTGTCAGACCAACCAAGTTCACGTCTTCGACACTGTGAAACTGACATGGAGCCAACCCGCTTTTAAAGGCTCCCCGCCTACTCCTAGGGACAGCCATACATGCACAGCCGTTGGTGATAATCTGTTTGTGTTTGGGGGCACAGATGGGATGAACCCTCTCAAGGATTTGCACATATTAGACACTTCTTTGCAAACATGGGTTTCTCCAAGCGTGAGAGGAGAAGGGCCACCAGCACGTGAGGGTCACAGTGCAGCAGTTGTTGGCAAAAGACTATTCATCTTTGGTGGCTGTGGAAAATCTGCAGATAATAATAATGAGCTCTACTACAATGATCTTTACATATTAAATACAGAGACATTTGTTTGGAAGTGTGCTACAACATCAGGCACTCCACCAACTCCTCGTGATAGCCATAGTTGTTCATCTTGGAAAAACAAAATTATTGTGATAGGGGGTGAAGATGGGCATGATTATTATTTGGCTGATGTCCATATCCTTGATACTGATACTCTAATTTGGAGGGAGCTGAGTACATCAGGTCAATTGTTGCCACCTCGAGCTGGTCATTCCACTGTTTCATTTGGCAAGAACTTGTTTGTTTTTGGTGGATTTACAGATGCCCAAAATCTCTATAATGACCTTTATATGCTCGATATTGATACTGGTGTTTGGACAAATGTTACAACTGCAATCAATGGCCCTTCTGCTAGATTTTCTGTGGCTGGTGACTGTTTAGACCCTTTTAAGGGTGGTGTTCTTATATTCATCGGTGGTTGTAATAAAAGTCTTGAGGCCCTGGATGATATGTATTACCTGTATACAGGGATTGCTCGGGAAAGTGAACAGAGACCAGAAAAGTTATCTTTAAGGAAGCAATTGAAACTGAAATGCCAAGAACAAAATCTCAATCCTAGCCAAAATCAAATGCTAGTTGGATATGGAGTGGGCTCTGATGTGGGCCAGATCATGACAGTGTTGAATTATAGCCAGCCAAGTAGACTAAATATCCCAGTTAACCAATCCCTACCTCCTGGAAAGAAAATGTTTGAAGCCAAGGTCACTGAAAACCTCTCAGAAGGATATACTATTGAAACTGTTATTGATGGAAAGCCTCTTCGTGGAATTCTGTTTGTAAACAAGCCAAACTCTCTGTATTCAGCTGCTCATACTTCCAGTAGGAAAAGGACTGTTGGTGAAATTGATAGTGCTGTCTCAAATGGTTTACACCCTAACCAATTAAAGACTCCTAAAGTGCTCATGCAAAATCAAATGGAAAACCGAGAAGCATTTCGAGGAGACAGTTCAGAATCTCATGAACCCCGCACTGAATCCATTGCGGTGCTTATGTCAAGTAACCCAATGACTGCCAATGCTTCTGACACCCATAAGGTTTCTGCCAACCCAGAACCAGAAGCTGCTGCTTTGAATTGCAATAATGAAAAACATGAAACACCCAAATCCTTAATTGAAAACTTGAAAATAGATGGAGCAAATGACGTGACAAGTTCCAAAGGTGAGGTGCAAACAAATGATCCAACAAATGTGTTAATTTCCAACTTTGAAGTTCCTAGACATGATACAAAAATTGATGCTCCAAACTACGACACTGAATTTCTGAAACCTGCTGCAGCTGAGAGTGCTATGTGTCTGTCAAATCAAGCTCCGGTGGCAGAATCCACAACTCCACAATTCCTACAACAAGAGAATGCAGTGAATCAGCAAAATTAA 1890 0.4296 MRWEKVEVKAIGTTTEGGGGVSEVYGPGKRWGHTCNAVKGGRLVYVFGGYGKDNCQTNQVHVFDTVKLTWSQPAFKGSPPTPRDSHTCTAVGDNLFVFGGTDGMNPLKDLHILDTSLQTWVSPSVRGEGPPAREGHSAAVVGKRLFIFGGCGKSADNNNELYYNDLYILNTETFVWKCATTSGTPPTPRDSHSCSSWKNKIIVIGGEDGHDYYLADVHILDTDTLIWRELSTSGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTTAINGPSARFSVAGDCLDPFKGGVLIFIGGCNKSLEALDDMYYLYTGIARESEQRPEKLSLRKQLKLKCQEQNLNPSQNQMLVGYGVGSDVGQIMTVLNYSQPSRLNIPVNQSLPPGKKMFEAKVTENLSEGYTIETVIDGKPLRGILFVNKPNSLYSAAHTSSRKRTVGEIDSAVSNGLHPNQLKTPKVLMQNQMENREAFRGDSSESHEPRTESIAVLMSSNPMTANASDTHKVSANPEPEAAALNCNNEKHETPKSLIENLKIDGANDVTSSKGEVQTNDPTNVLISNFEVPRHDTKIDAPNYDTEFLKPAAAESAMCLSNQAPVAESTTPQFLQQENAVNQQN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1641 629 SMART kelc_smart 43 93 IPR006652 GO:0005515
Aed6g1641 629 SMART kelc_smart 251 297 IPR006652 GO:0005515
Aed6g1641 629 SMART kelc_smart 200 250 IPR006652 GO:0005515
Aed6g1641 629 SMART kelc_smart 94 143 IPR006652 GO:0005515
Aed6g1641 629 Pfam Kelch motif 130 174 - -
Aed6g1641 629 SUPERFAMILY Galactose oxidase, central domain 26 231 IPR011043 -
Aed6g1641 629 Pfam Galactose oxidase, central domain 188 233 - -
Aed6g1641 629 Pfam Galactose oxidase, central domain 239 281 - -
Aed6g1641 629 Gene3D - 2 155 IPR015915 GO:0005515
Aed6g1641 629 Pfam Galactose oxidase, central domain 42 90 - -
Aed6g1641 629 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 450 - -
Aed6g1641 629 Gene3D - 156 395 IPR015915 GO:0005515
Aed6g1641 629 PANTHER KELCH REPEAT DOMAIN 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1641 Aed-Chr6 20275733 20281884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1641 57 316 Acyl Lipid Metabolism Gene Families AT3G05420 28.413 5.08e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1641 - - gmx:100803752 1125.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1641 6 20275733 20281884 Aed6g1641 6 20275733 20281884 ECH