Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1637 GGAAAAAGCAACAGGGTGAGTGAGTCATCGTCTCTTGTGATCTCCAGAAATCCGAACACACAACACACACACAAACTGAGCTTCAGAATCTTTACTCTCTCTCTCTCTCTCTCTTCCACGCTCTTCAAGGACTCTGTTCTGTTCGATCTCTCTCTTCGTGAATCGTGTCTTCCACCAAGCAAGCAGATGGCAATGCCAGAAACAATCCCTCTCACTGCTCCCAGTGCTCAAGTTGTTGGCAATGCCTTTGTGGAGCAATATTATCACATTCTGCACCAATCCCCAGAATTAGTGCACAGATTTTATCAGGATTCAAGTTTCTTAACCAGATCAGACAGCAATGGTGTGATGACAACTGTGACATCAGTACAAGAAATCCATGAAAAGATTATTTCTCTGAAATATGAAGATTATACAGCAGAAATAAAAACTGCAGATGCCCAGGAGTCACATAAGGGAGGTGTGATAGTTTTAGTAACTGGATGCTTAACTGGGAAAGATAATGTGAGAAAGAGGTTCTCACAGACATTCTTTCTGGCTCCACAAGAAAAGGGATATTATGTCTTAAATGACGTCTTTAGGTACATTGAGGAGAATGACACACCACAGTTAAGTTCCGTCTCAGTAAATGTCATCAAGGAAAATGCTGAGGCAGTGCATGAGCCAGAATCAGAGGATGTGCATGCTCTGAAACATGTTGTGGAAGACACTACAACTTTGGCAGAGGGTGAAAACCTTAATAATGGTGCTGAAGTTTATCATCCTCAGGATGAGGAAGAAGGATCAGTTATTGATGAAGAGGTTGCTGAACCCCCTACTGATTTAAGTCAGAATGACATTGTTACGGTTGATGATTCAACTTCTGCTGTCCAGGATGATGCACCAAAGAGATCATATGCATCCATTGTAATGAAAAGTCATGTAGCATCTGGTCATGTCTATGTTCCCAGCCGAGCTGCAAGAGTGGCATCTGCTAAATCCAGTGAACAATGGCCTACTGCTGCCAAATCAACTCCTGGGCCTGAGGCATTAGCTCCTAGTAGTGATAGTGCACCTGGGAGTAGTGATGTTCATGAAGAAGCTGAAGGTCACTCCATATACATACGGAACTTGCCATTTAACGCAACAGTTGAACAACTTGAAGAAGTCTTTAAGAAATTTGGTCCTATTAAGCATGGTGGCATCCAAGTTAGAAGTAGCAAGCACGGATTCTGTTTTGGCTTTGTTGAATTTGAGGAATTGAGTTCCATGCACACTGCACTTGAGGCTTCACCTATCATTGTTGGTGAGCGACAAGCTGTTGTTGAGGAAAAGAGAACTACTACACGAGTCAGCGGTAGTGGGAGAGGGAGGTATCCTTCAGGAAGAGGTGGTTTCCGAAGTGACAGTTTCAGGGCGCGTGGGAAGTTTGGCGGCAGTGGACGGGGTTATGGCAGAAATGAATTCAGAAACCAAGGAGGAGAATTCTCAGGACAACCTAGGAGTTCTCAACGGCCAAACCAAAACGGAGGTGGGCGTGGTGGACGTCAAGGTGTGGGGGGGAACCGTAATTCTACACCATCAGCTTCAGCAGCATGA 1578 0.4455 GKSNRVSESSSLVISRNPNTQHTHKLSFRIFTLSLSLSSTLFKDSVLFDLSLRESCLPPSKQMAMPETIPLTAPSAQVVGNAFVEQYYHILHQSPELVHRFYQDSSFLTRSDSNGVMTTVTSVQEIHEKIISLKYEDYTAEIKTADAQESHKGGVIVLVTGCLTGKDNVRKRFSQTFFLAPQEKGYYVLNDVFRYIEENDTPQLSSVSVNVIKENAEAVHEPESEDVHALKHVVEDTTTLAEGENLNNGAEVYHPQDEEEGSVIDEEVAEPPTDLSQNDIVTVDDSTSAVQDDAPKRSYASIVMKSHVASGHVYVPSRAARVASAKSSEQWPTAAKSTPGPEALAPSSDSAPGSSDVHEEAEGHSIYIRNLPFNATVEQLEEVFKKFGPIKHGGIQVRSSKHGFCFGFVEFEELSSMHTALEASPIIVGERQAVVEEKRTTTRVSGSGRGRYPSGRGGFRSDSFRARGKFGGSGRGYGRNEFRNQGGEFSGQPRSSQRPNQNGGGRGGRQGVGGNRNSTPSASAA 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1637 525 SUPERFAMILY NTF2-like 75 196 IPR032710 -
Aed6g1637 525 SUPERFAMILY RNA-binding domain, RBD 361 468 IPR035979 GO:0003676
Aed6g1637 525 SMART rrm1_1 365 436 IPR000504 GO:0003723
Aed6g1637 525 Gene3D - 347 446 IPR012677 -
Aed6g1637 525 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 63 513 IPR039539 -
Aed6g1637 525 Gene3D - 68 199 - -
Aed6g1637 525 CDD NTF2 75 197 IPR018222 -
Aed6g1637 525 Pfam Nuclear transport factor 2 (NTF2) domain 79 195 IPR002075 -
Aed6g1637 525 MobiDBLite consensus disorder prediction 485 504 - -
Aed6g1637 525 CDD RRM_SF 366 423 - -
Aed6g1637 525 ProSiteProfiles Nuclear transport factor 2 domain profile. 79 195 IPR018222 -
Aed6g1637 525 MobiDBLite consensus disorder prediction 325 361 - -
Aed6g1637 525 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 364 440 IPR000504 GO:0003723
Aed6g1637 525 PANTHER RAS GTPASE-ACTIVATING BINDING-LIKE PROTEIN 63 513 - -
Aed6g1637 525 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 366 423 IPR000504 GO:0003723
Aed6g1637 525 MobiDBLite consensus disorder prediction 438 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1637 Aed-Chr6 20234675 20239818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1637 K24983 - gmx:100801253 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1637 6 20234675 20239818 Aed6g1637 6 20234675 20239818 ECH