Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1634 ATGGCTTCCTTACCCGGTGTTGCTCCTTTTGTGTTTCTATTGCTTGTTATTGGATGCAATGCAAGGCCTTTGTATCCACTTCCCAGTAAATCTGATGATGGAATTAGAAAGCCCCTTCAAACTTTTCGCCCTTATAACATTGCTCATCGCGGTTCAAACGGAGAGCTTCCTGAAGAAACTCGTCCTGCATACTTGAGAGCTATTGAGGAGGGTGCAGACTTCATTGAAACTGATATCTTATCATCCAAAGATGGTGTTCTTATATGTTTCCATGATGTTACCCTTGATGATACTACTGACATTGCAAATCACACAGAGTTTGTTAATCGTAAAAGAACATTAGAAGTCCAAGGGGAAAACATCACTGGCTTTTTTACTGTTGATTTCACATTAAAGGAATTGAAGTCATTGAGGGTGAAACAGAGGTATAGCTTCAGGGACCAACAGTTTAATGGAAAGTACCCAATCATCACTTTTGAAGAGTTCATTGCCATAGCACTGGATGCACCCAGAGTTGTTGGAATATATCCAGAGATAAAAAACCCAGTATTTATCAATCAACATGTTAAATGGTCACATGGCAAAAGATTTGAGGACAAGTTTGTGGATACACTTCAGAAATATGGGTACAAGGGTTCCTACCTGTCAAAAGATTGGTTGAGTCAACCTGTATTTATTCAGTCATTTGCTCCAACTTCACTCGTGTATATAACAAATAAAACGGACTTGCCCAAGTCATATTGGGAGATTACATCTGATGAATACCTAGACTACATAAAGCAATATGTTGTGGGAATTGGACCTTGGAAGGACACCGTGGTACCTGTGGTGAAAAATTATATGGCAAATCCTACTAATCTTGTTGCCAGGGCACATGCTCATAACCTGCAGGTGCATCCATATACATACCGAAACGAGTACACGTATTTGCACTTCAACTTCAGTCAAGATCCGTATATGGAGTATCATTACTGGATCAACAAGATCGGCATTGATGGTCTCTTCACAGACTTCACTGGTAGTCTTCATTGTTATCAGGAATGGACCTCCAACCGTCAAGATGACAATGACAATGACAAGATTTCATCTAAGTTATTGCATAAAATTGCTTTGTTGGTCTCCTCTTATAAATAA 1134 0.3942 MASLPGVAPFVFLLLVIGCNARPLYPLPSKSDDGIRKPLQTFRPYNIAHRGSNGELPEETRPAYLRAIEEGADFIETDILSSKDGVLICFHDVTLDDTTDIANHTEFVNRKRTLEVQGENITGFFTVDFTLKELKSLRVKQRYSFRDQQFNGKYPIITFEEFIAIALDAPRVVGIYPEIKNPVFINQHVKWSHGKRFEDKFVDTLQKYGYKGSYLSKDWLSQPVFIQSFAPTSLVYITNKTDLPKSYWEITSDEYLDYIKQYVVGIGPWKDTVVPVVKNYMANPTNLVARAHAHNLQVHPYTYRNEYTYLHFNFSQDPYMEYHYWINKIGIDGLFTDFTGSLHCYQEWTSNRQDDNDNDKISSKLLHKIALLVSSYK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1634 377 CDD GDPD_ScGlpQ1_like 44 339 - -
Aed6g1634 377 Pfam Glycerophosphoryl diester phosphodiesterase family 49 340 IPR030395 GO:0006629|GO:0008081
Aed6g1634 377 ProSiteProfiles GP-PDE domain profile. 44 346 IPR030395 GO:0006629|GO:0008081
Aed6g1634 377 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 345 IPR017946 GO:0006629|GO:0008081
Aed6g1634 377 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 12 350 - -
Aed6g1634 377 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6 12 350 - -
Aed6g1634 377 SUPERFAMILY PLC-like phosphodiesterases 44 342 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1634 Aed-Chr6 20220567 20224654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1634 16 350 Acyl Lipid Metabolism Gene Families AT5G08030 73.504 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1634 K01126 - gmx:100778145 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1634 6 20220567 20224654 Aed6g1634 6 20220567 20224654 ECH