Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1631 ATGGCACAAACCCAGAGACCCTGTTCAAGCGTCCTCGATTCTCTGGGGGAAGAAATCGTGAGAATCATCGCACCCGTTTCAATATGCATGTTCCTGGTCGTAATCCTAGTGTCAATTCTGAACACCGATTCTTCTCTCTTCGACGCGTCGATGAGCATGGTCACCATCGCGTACAACGAAACAACCTCGGACTCCACCTGGGACAAATTCCTAGGAGCCCTTTTGAACTCCTTGGCCTTCGTCGTCCTCGTCACCTTCGCAACCTTCGTCTTGGTCCTCCTCTTCTACTTCCGATGCACCAGGTTCTTAAAACTCTACATGGCTTTCTCCACTTTCATTGTGTTGCTATTCCTCGGCGGTGAAGTCTCGATCTTTTTGATCCAAAAGTTTAGTATTCCCATCGATTGCATTACGTTCTTCCTCGCTCTGTGTAATTTCGCTGTTGTGGGTGTTTTGACCGTGTTTGTGTCAAAAATGGCGATTCTTGTGACGCAGGGGTATTTGGTTGTTGTTGGAATATTGGTTGCTTATTCGTTTACTATGTTGCCTGAGTGGACCACGTGGTCCCTTCTTGTTGCTATGGCGTTATATGATCTTGCTGCAGTTTTGTTACCAGTTGGGCCCTTAAGGCTTTTGGTAGAGCTTGCAATTTCAAGGGATGAGGAAATTCCCGCATTGGTTTATGAGGCTAGGCCAGTTAACCATGGTAATTTTGATGCTACTGATGTTGTGCGGCGGCGCCTGTGGAGAGATAGTAGGGTTCAGAATTTGAATGCTGAATCACAACCCTCTGATTTGGATGCAAGCTCTGGCAGCGATAACCGGGATGGAGCAAACTTGGTTAGGGAAAACGCATTGTCGAATTCAAATTTGAATGCTAATAGTACTAGTGGTGGCTCCTATGGTATTGGAAATTTGGTGATTGCGGAAGAGGGACGGGTGCGAGTTCAAGAGACTGGAAATTCAGAACTTTCTGCACCCTTGATTGAACGTGGAATGAGTGTCCATCTTGGTATGGGGGAAGATACTGTGCCACTTGAAAACTTGATGCTAGAGGGAATTGGTTTAGGTACTTCTGGTTCTATCAAGTTAGGGCTTGGAGACTTCATCTTCTATAGTGTTTTGGTTGGCAGAGCGGCAATGTATGATTACATGACAGTGTATGCGTGTTATCTTGCCATCATTGCGGGTCTTGGTGTGACTTTGATGCTTCTGGCTTTTTATCAGAAAGCTTTGCCTGCTCTTCCCGTGTCTGTCGGACTGGGCATGATGTTTTATTTCTTGACCAGGCTTTTGCTTGAATACTTCACTTATGATGCTTCATATTTTGGTTCCAAGGAGATATTGAACCTTATGGAGAAAGGAAATGGAGATGCCGGGGATCAAACCCCACCACATACATGTCCTTAG 1410 0.4574 MAQTQRPCSSVLDSLGEEIVRIIAPVSICMFLVVILVSILNTDSSLFDASMSMVTIAYNETTSDSTWDKFLGALLNSLAFVVLVTFATFVLVLLFYFRCTRFLKLYMAFSTFIVLLFLGGEVSIFLIQKFSIPIDCITFFLALCNFAVVGVLTVFVSKMAILVTQGYLVVVGILVAYSFTMLPEWTTWSLLVAMALYDLAAVLLPVGPLRLLVELAISRDEEIPALVYEARPVNHGNFDATDVVRRRLWRDSRVQNLNAESQPSDLDASSGSDNRDGANLVRENALSNSNLNANSTSGGSYGIGNLVIAEEGRVRVQETGNSELSAPLIERGMSVHLGMGEDTVPLENLMLEGIGLGTSGSIKLGLGDFIFYSVLVGRAAMYDYMTVYACYLAIIAGLGVTLMLLAFYQKALPALPVSVGLGMMFYFLTRLLLEYFTYDASYFGSKEILNLMEKGNGDAGDQTPPHTCP 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1631 469 Gene3D Presenilin 356 438 IPR042524 -
Aed6g1631 469 PRINTS Presenilin family signature 181 188 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aed6g1631 469 PRINTS Presenilin family signature 198 215 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aed6g1631 469 PRINTS Presenilin family signature 23 33 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aed6g1631 469 PANTHER PRESENILIN 9 441 - -
Aed6g1631 469 Pfam Presenilin 16 436 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aed6g1631 469 SMART psh_8 71 433 IPR006639 GO:0004190|GO:0016021
Aed6g1631 469 PANTHER PRESENILIN 9 441 IPR001108 GO:0004190|GO:0016021|GO:0016485
Aed6g1631 469 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1631 Aed-Chr6 20197904 20199506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1631 1 441 Miscellaneous Gene Families AT2G29900 57.240 2.82e-146 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1631 K04505 - gmx:100780823 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1631 6 20197904 20199506 Aed6g1631 6 20197904 20199506 ECH