Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1624 ATGGAGCACGAGAATGAGAAAAACATTGTCAACGGTCAACGGCGTGTGGGTTTATTACACGACGAGAGGATGTGTAAGCACCACACACCAGGCAACGAGGACCATCCCGAGACCCCTAATCGCACCAGAGCTATTTGGAACAAACTCCAAAGCGCCGGTATTCCCCAACGATGCGTGATTTTGGAAGCCAAAGAAGCTGAAGACAAACATCTACTGTCAGTGCACTCCAAAAATCATGTGAATCTGATTAAGAACATCAGCTCAAAGCAGTTCAATTCGCGGAGGCATAAGATTGCCTCGAAATTGAATTCCATTTATTTTAATGAAGGCTCATCAGAAGCTGCGTACCTTGCTGCTGGCTCTGCAGTTGAGGTTGTTAAAAGAGTGGCCAGCAGGGAATTGGATTCTGCTGTTTCCATTGTTAGGCCTCCGGGTCATCATGCAGAACAAAATGAAGCTATGGGATTTTGTCTGTTCAATAATGTTGCAGTTGCTGCAAGATATCTCTTAGATGAAAGACCAGAATTAGGTGTGAAGAAAATATTAATCGTTGATTGGGATGTTCATCATGGAAATGGTACTCAAAAAATGTTCTGGAATGATTCTCAAGTTTTATTCTTTTCTGTGCACAGGCATGAGTTTGGGAGTTTTTATCCAGCTAATGATGATGGATTTTATACCATGATTGGAGAAGGAGCAGGTGCTGGGTATAATATAAATGTCCCCTGGGAGAATGGGCGATGTGGTGATGCAGATTACTTCGCAGTGTGGGACCACATCTTGCTTCCTGTTGCTAAAGAATTTAATCCAGATATAATTATAGTTTCTGCTGGATTTGATGCAGCTGTTGGTGACCCTCTGGGAGGATGTCGTGTCACACCATTTGGTTATTCTGTTCTGTTGGAGAAGTTGATGAATTTTGCTGAAGGTAGGATTGTTCGGCAGGAGTTAAGTCCCTTTTGGCCTACTCTTGCATGTGAATTACCACAAAAGGTAATCTCACAAATGGCACCACCTCCGTATACTCTTATCTCAAGCTCTGACTCTGGGGCTGAGGATGACAAGGGTGAACCAAGTTCAGAAATTCTTGGTGAACTTCTTGAGGATGTCATAAAACCACTTTCCAAACTGAAAGTTGATGCTGATGAAGAGACTGATGTTTCTAGTACTTGGCGATCTGAATTGTCAAAAGTTGATATATGGTATGCCTCATATGGATCAAATATGTGGAAACCAAGATTAAATTGCTACCTAGCAGGTGGACAGGTGGAAGGTATGCAGAAGGTCTGTTCTGGTTCAGTGGATAGAACACTGCCAAAAGAGATCCTGTGGAAGACTTTCCCTTGTCAAATATTCTTCGGTTGCAATTCATCGCGTTCATGGGGTGAGGGAGGAGTTGCATTTGTTAATCCTGAGAAAAACTTACAACACAACACCTACATGTGCCTGTACAAAATTTCGGTAGAGCAGTTCAATGATATTTTGTTTCAGGAAAATGATTTAATCCTTGATGCGGGCTCTCCTTTATTTGACATAACTACCCTGAATGCTATCTCTAACAAGGAGTTCAACTCTCTAAAGGTTGTCAAGGGTGGTTGGTATGGCAATGTTGTCTACTTAAGAAAGGAGCAGGATATTCCAGTAATTACCATGACGTGTTCGCTTCTTGATATTGAACGTTTCAAATCTGGGAAGCTACCATTACGTGCCCCTAATAAAGCGTATGCCAACACCTTAATAAAAGGGCTTGTAGATGGAGGACAGCTTTCAGAGGCGGAGGCCATCGCTTACATAGAAGGTGCTGCTGCTAAATCATTGTAA 1821 0.4245 MEHENEKNIVNGQRRVGLLHDERMCKHHTPGNEDHPETPNRTRAIWNKLQSAGIPQRCVILEAKEAEDKHLLSVHSKNHVNLIKNISSKQFNSRRHKIASKLNSIYFNEGSSEAAYLAAGSAVEVVKRVASRELDSAVSIVRPPGHHAEQNEAMGFCLFNNVAVAARYLLDERPELGVKKILIVDWDVHHGNGTQKMFWNDSQVLFFSVHRHEFGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCRVTPFGYSVLLEKLMNFAEGRIVRQELSPFWPTLACELPQKVISQMAPPPYTLISSSDSGAEDDKGEPSSEILGELLEDVIKPLSKLKVDADEETDVSSTWRSELSKVDIWYASYGSNMWKPRLNCYLAGGQVEGMQKVCSGSVDRTLPKEILWKTFPCQIFFGCNSSRSWGEGGVAFVNPEKNLQHNTYMCLYKISVEQFNDILFQENDLILDAGSPLFDITTLNAISNKEFNSLKVVKGGWYGNVVYLRKEQDIPVITMTCSLLDIERFKSGKLPLRAPNKAYANTLIKGLVDGGQLSEAEAIAYIEGAAAKSL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1624 606 SUPERFAMILY Arginase/deacetylase 14 313 IPR023696 -
Aed6g1624 606 Gene3D - 388 604 - -
Aed6g1624 606 Gene3D Histone deacetylase domain 8 314 IPR037138 -
Aed6g1624 606 PANTHER BNAA09G05590D PROTEIN 312 559 - -
Aed6g1624 606 PANTHER BNAA09G05590D PROTEIN 13 313 - -
Aed6g1624 606 Pfam Histone deacetylase domain 35 309 IPR023801 -
Aed6g1624 606 PRINTS Histone deacetylase superfamily signature 270 280 IPR000286 -
Aed6g1624 606 PRINTS Histone deacetylase superfamily signature 143 166 IPR000286 -
Aed6g1624 606 PANTHER HISTONE DEACETYLASE 13 313 - -
Aed6g1624 606 PANTHER HISTONE DEACETYLASE 312 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1624 Aed-Chr6 20157495 20163539 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1624 K11406 - gmx:100788831 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1624 6 20157495 20163539 Aed6g1624 6 20157495 20163539 ECH
Aed6g1624 6 20157495 20163539 Aed10g1051 10 9338049 9340103 PCT