LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed6g1615	ATGGTGAAGATATGTGGAATTGGAGCCGGGTACGTGGGGGGTCCTACAATGGCAGTGATTGCTCTCAAATGTCCCTCAATTGAAGTGGCTGTGGTTGACATCTCTCACTCTCGCATCTCAGCTTGGAACAGCAGCAACAACAAACTCCCCATTTACGAGCCTGGCCTAGAACAAGTGGTGAATCAGTGCAGAGGAAAGAACCTCCTCTTCAGCACCGATGTAGAAAAGCACGTGCATGAGGCAGACATAATCTTTGTCTCAGTGAACACCCCAACAAAAATCAGAGGACTTGGAGCTGGAAAAGCTGCAGACTTGACCTATTGGGAGAGTGCAGCTAGAATGATAGCTAGTGTTTCAAAGTCAAACAAAATTGTTGTTGAGAAATCCACTGTCCCAGTTAGAACAGCTGAGGCAATTGAGAAAATCCTAACTCACAATACTAATACTAACATCAAGTGTCAAATTTTGTCAAATCCTGAGTTTCTCTCTGAGGGAACAGCCATTGAGGACCTTCTAAACCCTGATAGGGTTCTGATTGGAGGGAACCAAGACCCTGAAGGTTTAGAAGCAGTTCAAAAACTGAAGGCTATATATGCTCATTGGGTGCCTCAAGACAGAATCATAACAACCAATCTTTGGTCAGCAGAACTTTCAAAGTTAGCTGACAATGCCTTTTTGGCACAAAGGATTTCATCTATCAATGCTATGTCAGCTCTATGTGAGGCCACTGGGGCTGAAGTTTCACAACTTTCTCATGCTCTCAGCAAAAACACCAAAATTGGACCCAAGTTCCTCAATGCTAGTGTTGGCTTTGGTGGCTCTTGCTTTCAAAAGGACATACTCAACTGGTTTACATATAGCAATGGCCTCACTCAAGTGGCAAACTACTGGAAACAAGTGATCAAGGTAAATGACTACCAAAAGAGTAGGTTTGTCAACAGGGTTGTGATATCAATGTTCAACACGGTTTCGGGTAAGAACATTGCAATTCTTGGGTTTGCCTTCAAGAAAGATACCAGTGACACAAGGAAAACCCCTGCAATTGATGTTTGCAAAGGCCTTTTGGGGGATAACGCGTGCTTGAGGATCTATGATCCACGCGTTACCGAGGAGCAGATTCGAAAGGATTTGTCAGTGGATGAAGATGGCGTTGTTGAAAGGGACCACAGTGTTATAAGTGTTGTTGGGGATGCTTATGAGGCAACTAAAGATGCTCATGGGATATGCATTCTTACAGAGTGGGATGAGTTCAAGACAATTGATTATCAGAAAGTGTTTGAAAACATGCAGAAACCAGCTTTTGTGTTTGATGGTAGAAACATATTGAATGTTGACAAGCTTAGAGAGATTGGATTCATTGTGTACTCAATTGGGAGGCCATTAGACCAATGGCTCAAGAACATGCCCCAACAACAGGCTTGA	1422	0.4339	MVKICGIGAGYVGGPTMAVIALKCPSIEVAVVDISHSRISAWNSSNNKLPIYEPGLEQVVNQCRGKNLLFSTDVEKHVHEADIIFVSVNTPTKIRGLGAGKAADLTYWESAARMIASVSKSNKIVVEKSTVPVRTAEAIEKILTHNTNTNIKCQILSNPEFLSEGTAIEDLLNPDRVLIGGNQDPEGLEAVQKLKAIYAHWVPQDRIITTNLWSAELSKLADNAFLAQRISSINAMSALCEATGAEVSQLSHALSKNTKIGPKFLNASVGFGGSCFQKDILNWFTYSNGLTQVANYWKQVIKVNDYQKSRFVNRVVISMFNTVSGKNIAILGFAFKKDTSDTRKTPAIDVCKGLLGDNACLRIYDPRVTEEQIRKDLSVDEDGVVERDHSVISVVGDAYEATKDAHGICILTEWDEFKTIDYQKVFENMQKPAFVFDGRNILNVDKLREIGFIVYSIGRPLDQWLKNMPQQQA	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed6g1615	473	Gene3D	-	1	211	-	-
	Aed6g1615	473	SUPERFAMILY	UDP-glucose/GDP-mannose dehydrogenase C-terminal domain	315	455	IPR036220	-
	Aed6g1615	473	PANTHER	UDP-GLUCOSE 6-DEHYDROGENASE	1	470	-	-
	Aed6g1615	473	PANTHER	UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE	1	470	IPR028356	GO:0003979
	Aed6g1615	473	Pfam	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	3	190	IPR001732	GO:0016616\|GO:0051287
	Aed6g1615	473	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	3	205	IPR036291	-
	Aed6g1615	473	Pfam	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	329	443	IPR014027	GO:0016616\|GO:0051287
	Aed6g1615	473	Gene3D	-	212	243	-	-
	Aed6g1615	473	Gene3D	-	244	472	-	-
	Aed6g1615	473	SUPERFAMILY	6-phosphogluconate dehydrogenase C-terminal domain-like	213	310	IPR008927	-
	Aed6g1615	473	SMART	UDPG_MGDP_dh_C_a_2_a	329	444	IPR014027	GO:0016616\|GO:0051287
	Aed6g1615	473	PIRSF	UDPglc_DH_euk	1	471	IPR028356	GO:0003979
	Aed6g1615	473	Pfam	UDP-glucose/GDP-mannose dehydrogenase family, central domain	213	305	IPR014026	GO:0016616\|GO:0051287
	Aed6g1615	473	TIGRFAM	NDP-sugDHase: nucleotide sugar dehydrogenase	3	440	IPR017476	GO:0016616
	Aed6g1615	473	PIRSF	UDPglc_GDPman_dh	2	459	IPR017476	GO:0016616

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed6g1615	Aed-Chr6	20085256	20086682	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed6g1615	K00012		-	gmx:100781197	829.32

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed6g1615	6	20085256	20086682	Aed6g1615	6	20085256	20086682	ECH