Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1594 ATGGGGCAAGAGAATCACCACAAGCGCAGCACCAGCGCGGCGGGGTTGCCCACCTCGCACGCGCGAAGCCGCGGCGGCGCGCTCCCCCGCGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACAATCCTCTGCGGCTTCGTCACCATCCTCGTCCTACGTGGCACCATCGGCGTCAACCTCGGCTCCTCCGACAACGACGCCGTCAACCAAAACCTCATTGAAGAGACCAACCGCATCCTCGCCGAGATCCGATCCGACGCCGACCCCTCCGATCCCGACGACCAGCAATTCTTCAACCCTAACGCCACCTTCACCCTCGGCCCCAGGATCGATAATTGGGACACCGAGCGCAAAAATTGGCTTCACCAAAACCCGGAGTACCCTAATTTCATCAGAGGTAAACCTCGCGTCTTGCTCCTTACCGGTTCCCCTCCCAAGCCCTGTGATAACCCTATTGGAGATCATTACCTTTTGAAGTCGATTAAGAACAAAATTGATTACTGTAGATTACACGGGATTGAAATTGTGTATAATTTGGCTCATTTGGATGTCGAACTTGCTGGGTATTGGGCTAAGTTGCCTATGATTCGGAGGTTGATGCTGTCTCACCCTGAGGTGGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTCACTGATATTGTGTTTGAGCTTCCTTGGTCTAAGTATGATGACTACAATATGGTGCTTCATGGATACCCTGATTTGTTGTTCGAGCAGAAGTCTTGGATTGCGATCAATACTGGGAGTTTTCTGTTTAGGAACTGCCAGTGGTCTTTGGATTTGCTTGATGATTGGGCTCCCATGGGCCCCAAGGGGCCAGTTCGCGAGGAGTATGGCAAGATCCTGACGGCGAACCTCAAGGGGAGGCCGGCATTTGAGGCCGACGATCAGTCTGCTTTGATATATTTGCTTCTGTCCAAAAAGGACAAGTGGATGGGTAAGGTGTTTCTTGAGAACTCGTTCTATTTGCATGGTTACTGGGCTGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCACCCCGGGTTGGGGGATGAGAGGTGGCCGTTTGTTACGCATTTTGTTGGGTGTAAGCCGTGTGGGAGCTATGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTACAATTTTGCTGATAATCAGGTGCTCAAGCTCTATGGCTTCAGGCATCGCGGTCTGTTGAGTCCTAAGATCAAGAGGATCAGGAATGAGACAGTGGCTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGACATCCTACAGAAAACCGGGAATCAAAGAGCTAG 1341 0.5108 MGQENHHKRSTSAAGLPTSHARSRGGALPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDNDAVNQNLIEETNRILAEIRSDADPSDPDDQQFFNPNATFTLGPRIDNWDTERKNWLHQNPEYPNFIRGKPRVLLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDIVFELPWSKYDDYNMVLHGYPDLLFEQKSWIAINTGSFLFRNCQWSLDLLDDWAPMGPKGPVREEYGKILTANLKGRPAFEADDQSALIYLLLSKKDKWMGKVFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSPKIKRIRNETVAPLEFVDQFDIRRHPTENRESKS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1594 446 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 137 281 IPR029044 -
Aed6g1594 446 Pfam galactosyl transferase GMA12/MNN10 family 137 375 IPR008630 GO:0016021|GO:0016757
Aed6g1594 446 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 7 439 IPR008630 GO:0016021|GO:0016757
Aed6g1594 446 MobiDBLite consensus disorder prediction 1 31 - -
Aed6g1594 446 MobiDBLite consensus disorder prediction 1 18 - -
Aed6g1594 446 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 7 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1594 Aed-Chr6 19916228 19917568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1594 3 446 Glycosyltransferase AT5G07720 76.889 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1594 K08238 - gmx:100793238 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1594 6 19916228 19917568 Aed6g1594 6 19916228 19917568 ECH