Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1580 ATGGACTTCAACCTTGCATTAGTTGTTGTAGTAACCACCGTTTTGGGAATTGGGCTCGAAGGATGCGACAGCAAGGTTGTGCAGTTCATTTTTGGAGACTCACTCTCTGATGTTGGAAACAACATGCATCTCTCAAGAAGCCTTGCTCAGGCAAGCTTGCCTTGGTATGGTATAGACATGGGTAACGGCTTACCCAATGGAAGGTTCACTAATGGTCGCACAGTTGCTGACATAATAGGTGACAATATGGGACTTCCTAGGCCTCCTGCATATCTGGACTCATCTGTAAATGAACAAGTTATACTAGAAAACGGTGTGAACTATGCTTCTGGTGGTGGTGGCATCTTGAATGAAACTGGCGCTTATTTTATCCAAAGGTTTTCCCTGGACAAGCAAATTGAGCTGTTTCAGGGGACACAAGAGTTAATTAGAGGCAAAATTGGAGAAAAGGCCGCATACAATTTAGGAGCAAGACAACTAGTGGTTTTTGGATTGGGTCCGATGGGTTGCATTCCTCTTCAAAGGGTGCTTACTACAACTGGTAATTGTCGAGAAAAGGCAAACAAGCTGGCTCTTACCTTCAACAAAGCTTCAAGCAATTTAGTTGCTGACTTGGCTAAGCAATTTCCTGAATCAAGCTATAAATTTGGAGATGCATATGATGTTGTTTATAATGTGATTAACAATCCAAATAAGTATGGATTCCAAAACGCAGATTCTCCCTGTTGCTCCTTTTGGAATATTCGACCCGCCCTTACATGTGTGCCTGCATCAAGTCTCTGCAAAGATAGAAGTAAATATGTGTTTTGGGATGAGTACCACCCCACAGACAGTGCTAATGAGCTAATTGCAAATGAACTCATAAAAAAATTTGGACTTTCAAATACTGATCAAGGGGGTGCACCTTCACCAGCACCAGCTGTTGCTCCATCTCCCGAAGACTAA 945 0.4265 MDFNLALVVVVTTVLGIGLEGCDSKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFTNGRTVADIIGDNMGLPRPPAYLDSSVNEQVILENGVNYASGGGGILNETGAYFIQRFSLDKQIELFQGTQELIRGKIGEKAAYNLGARQLVVFGLGPMGCIPLQRVLTTTGNCREKANKLALTFNKASSNLVADLAKQFPESSYKFGDAYDVVYNVINNPNKYGFQNADSPCCSFWNIRPALTCVPASSLCKDRSKYVFWDEYHPTDSANELIANELIKKFGLSNTDQGGAPSPAPAVAPSPED 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1580 314 CDD SGNH_plant_lipase_like 29 290 IPR035669 -
Aed6g1580 314 MobiDBLite consensus disorder prediction 294 314 - -
Aed6g1580 314 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 154 - -
Aed6g1580 314 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 154 304 - -
Aed6g1580 314 Pfam GDSL-like Lipase/Acylhydrolase 29 136 IPR001087 GO:0016788
Aed6g1580 314 Pfam GDSL-like Lipase/Acylhydrolase 151 286 IPR001087 GO:0016788
Aed6g1580 314 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 154 - -
Aed6g1580 314 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 154 304 - -
Aed6g1580 314 Gene3D SGNH hydrolase 143 292 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1580 Aed-Chr6 19842382 19844248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1580 29 287 Acyl Lipid Metabolism Gene Families AT4G10950 29.299 4.74e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1580 - - gmx:100776733 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1580 6 19842382 19844248 Aed6g1580 6 19842382 19844248 ECH