Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1559 ATGTCTAAGGTATTATTGTTATTATGTTTTCTCTCTGGGGTTCTGCTCCTTGTTCAGGCACATGAACATCATGAGAAAATTGGGGTTTATGAACTGACGAGAGGAGATCTAAGGCTGAAGTTGACAAATTATGGTGCTACAATTATCTGTGTCATAACCCCTGATAAACATGGTAAATTAGCCGATATTGTTCTTGGCTACGATTCCATTGATTCTTATAAGAAAGTACACTCAAAATCTAAAATGTGGTTATGGCCTTCAAATTTGTTGCGGAATGATACAGTTTACTTTGGTGCCCTTATTGGACGTGTGGCAAATAGGATTGGAGGAGCTGAATTCACATTGGATAGCAAAACCTACAAATTATCCGCTAATGATCACGGAAACACTTCACGTGATGTTGTATGGTCAGTGGAGTCCTACAAGAAACACAGTCATGTAACATTTACCTACGACAGTTTTGAAAATGAACAAGGTTTCCCTGGAAAACTTAAGGTCTCAGTGACTTACATGCTCATTGGAAAACACAATTTGGCTGTGAAAATGATAGCCAAGCCAGTGGACAAAGCAACACCAGTGAATCTAGCACAGCATGCTTATTGGAACCTTAGGGGCCACAACAGTGGTGACATTCTTTCTCACACTGTTCAGATTTTTGGCTCATACATCACACCAGTGGACAAGCTTCTCATCCCCACTGGAGAAATCATATCTGTTAAGGGCACCCCTTATGATTTCCTTGAACCAAAAGAAGTTGGAAGGCAGATTCAGGAAGGCCTATATGACATTAACTATGTGATAGATAAAAGTTTCCAAAAGCACTTAAGTAAGGTTGTTGTGGTGAGAGACCCTGTCTCTGGGAGGAAATTGGAGCTTTGGTCAAACCAACTTGGTCTTCAGTTCTATACTAGTGGCCAGTTGAATGCTACCAAAGGCAAAGATGGAGCCATATACCACAAGCATGCTGCCATTGCCTTGGAGACACAGGGTTTCCCGGATTCTGTGAATTTCCCTTACTTTCCATCAAAGATTGTGAAGCCTGGGGAGATTTACAAGCACATCATGCTCTACAGATTCACAGCTAACTAA 1089 0.4114 MSKVLLLLCFLSGVLLLVQAHEHHEKIGVYELTRGDLRLKLTNYGATIICVITPDKHGKLADIVLGYDSIDSYKKVHSKSKMWLWPSNLLRNDTVYFGALIGRVANRIGGAEFTLDSKTYKLSANDHGNTSRDVVWSVESYKKHSHVTFTYDSFENEQGFPGKLKVSVTYMLIGKHNLAVKMIAKPVDKATPVNLAQHAYWNLRGHNSGDILSHTVQIFGSYITPVDKLLIPTGEIISVKGTPYDFLEPKEVGRQIQEGLYDINYVIDKSFQKHLSKVVVVRDPVSGRKLELWSNQLGLQFYTSGQLNATKGKDGAIYHKHAAIALETQGFPDSVNFPYFPSKIVKPGEIYKHIMLYRFTAN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1559 362 PANTHER ALDOSE-1-EPIMERASE 3 362 - -
Aed6g1559 362 Gene3D - 17 361 IPR014718 GO:0030246
Aed6g1559 362 Pfam Aldose 1-epimerase 81 358 IPR008183 GO:0005975|GO:0016853
Aed6g1559 362 PIRSF GALM 17 362 IPR015443 GO:0016853|GO:0019318
Aed6g1559 362 CDD galactose_mutarotase_like 30 359 - -
Aed6g1559 362 PANTHER ALDOSE 1-EPIMERASE 3 362 - -
Aed6g1559 362 SUPERFAMILY Galactose mutarotase-like 22 359 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1559 Aed-Chr6 19691871 19693455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1559 1 361 Miscellaneous Gene Families AT3G47800 53.784 7.45e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1559 K01785 - gmx:100806956 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1559 6 19691871 19693455 Aed6g1559 6 19691871 19693455 ECH