Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1545 ATGACGACGCCGTTTCAGCAACCACCCCAAACCGTGCGGAGACTGGTCGTGGAGGTAATCGACGCGCGCAACCTGCTCCCGAAGGATGGGCAAGGCAGTTCGAGCCCTTACGTGGTGGCGGACTTCGACGGGCAAAGGAAGCGAACCACGACGCGGTTCAAGGAGCTCAGCCCGGTCTGGAACGAGCCTCTCGAGTTCATCGTCTCCGACCCGGAGAACATGGAGTTCGAGGAGCTCGAAGTTGAGGTCTACAACGACAAGAAGTTCGGCAACGGAAGCGGCCGCAAGAACCACTTCCTCGGGAGGGTTAAGCTCTACGGAACACAGTTCTCCAGAAGAGGAGAAGAAGCTCTTGTTTACTACACGCTCGAGAAGAGGAGCGTCTTCAGTTGGATAAGAGGAGAAATTGGCCTCAGGATTTATTACTATGACGAGATGCTTATGGAAGAGGACAAACACCCGCCGCCGCAGCAGGAGGAGCAAGGTGAGAGAACGGAGCAAGACCGAAACAGGCCGCCGCTGCCGCAGGGGGTGGTAGTTGTCGAGGAGGGACGGGTTTTTGAGGCTCCGGGACCGATGGAGCAATGCATGCCTCTTCCTACAGGTCCTCCTCATTCGCCGCGCGTTGTGGTGGTTGAGGAGTCGCCGCCGCCGGTAGTTCACGTTCCGCCGGATCCGCCGTTGCCGGAAATGTTTGAGGCTCCGACGTCGGAAATGCAGTTCCACCCCGCCGAGGTGAGGAAAATGCAGGCAAACAGAGGGGAGAGGGTGAAGATTATGAAGCGGCCGAACGGTGATTACCTGCCTAAAGACATTTCTGGAAAGAAAGCTGGTAATGATTCTGAGCGAGTTCATCCGTTCGATCTGGTGGAGCCTATGCAGTACCTGTTTGTGAAAATCTGGAAGGCGCGTGGGCTCGCTCATCCCATTGAAGGCCCAATCGTCAGGGTTCGGATGTCGAGCCAATCCAGGAGGTCGAAGCCCGCCAGTTACCGGCCCAACGAGCCCATTGATTCGCCTGAGTGGAACCATGTGTTTTTGCTGGATTACAACAAGACCACCGACGCCAACACCGCCACGCTCGAGATTTCGGTTTGGGATTCCCCGTCGGAGAACTTTCTCGGCGGCGTTTGCTTCGACCTTTCCGACGTTCCCGTGAGAGATCCTCCGGACAGCCCCTTGGCTCCGCAATGGTACCGCCTCGAAGGAGGCACTGCCGATCAGAATCCCGGGAGAGTCTCCGGCGACATTCAGCTGTCCGTGTGGATCGGGACTCAATCCGACGACGCGTTTCCGGAAGCATGGATCTCAGATGCACCGTACGTGGCACACACTCGATCCAAGGTTTACCAGTCGCCGAAGCTCTGGTACCTGCGCGTGACTGTGGTGGAGGCGCAGGACTTAAATATTGCTCCCAATCTGCCACCCTTGACGGCGCCGGAAGTGAGGGTGCATGTGCAATTAGGGTTCCAATCGCAGCGAACGAGAAGAGGATCCATGAACCACCGTAGCTTATCTTTTCACTGGAACGAAGACCTTCTCTTCGTCGCCGGGGAGCCACTAGAAGATTCTGTCATCGTTCTGTTAGAAGATCGGACTACCAAGGAACCGGCGCTGCTAGGCCATGTCGAGATTCCTTTGAGCTCAATCGAGCAGCGAATCGACGAGCGCCACGTGGCGGCTAAGTGGTTCCCCTTAGAGAGCGGACCCTACTGCGGGAGAGTCTACCTGCGCCTCTGCCTGGAGGGAGGTTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTCCGTCCCACCGCGAAACAGTTGTGGAAACCGGCGGTGGGGATTCTAGAGCTTGGGATTCTTGGCGCTCGCGGGCTCCTCCCGATGAAATCCAAAGGCGGTGGAAAGGGGTCCACCGATGCTTACTGTGTGGCCAAGTATGGGAAAAAGTGGGTCCGGACCCGCACCGTAACCGACACATTCGATCCACGCTGGAACGAGCAGTACACGTGGCAGGTCTACGACCCCTGCACTGTCCTCACCGTCGGAGTGTTCGACAACTGGCGCATGTTCGTTGACGTGTCAGAGGACAGACACGATTGCCGTATTGGAAAGGTACGCATACGCGTCTCTACGCTGGAGAGCAACAGAATATACACAAACTCCTACCCACTCCTCGTGCTCACGCGAACCGGCTTGAAGAAGATGGGTGAAATAGAGTTAGCGGTTCGGTTCGCGTGCCCCTCCTTGCTGCCCGACACGTGCGCCGTTTACGGTCAGCCCCTGCTTCCACGTATGCACTACCTCCGCCCGCTCGGGGTGGCGCAGCAGGAGGCTCTCCGCGGGGCCGCAACGAAGATGGTGGCGCAGTGGCTGGCGCGGTCGGAGCCGCCGTTGGGGCACGAGGTGGTTAGGTACATGCTGGACGCGGACTCGCACGTGTGGAGCATGAGGAAGAGCAAGGCGAATTGGTTCAGAATCGTGGCGGTGTTGGCCTGGGCGGTTGGAGTGGCGAAATGGTTAGATGATATTAGAAGGTGGAAGAACCCAGTTACCACAGTGCTGCTCCACATTCTGTATTTAGTCCTTGTTTGGTATCCCGATTTGGTTGTCCCCACTGGGTTCTTATACGTGGTCTTAATTGGGATATGGTATTACCGGTTTAGGCCGAAGATACCGGCCGGGATGGACACCCGGTTATCGCAGGCCGAAGCGGTTGACCCGGACGAGTTGGACGAGGAATTCGACACAATGCCAAGTTCGAAGCCACCCGATGTAATTCGAATGCGTTATGATAGGTTAAGAATGCTGGCAGCTCGGGTCCAAACGGTGTTGGGTGATTTTGCTACGCAGGGAGAGAGGCTTCAAGCCTTGGTTAGTTGGAGGGACCCCAGGGCCACGAAGCTGTTCATTGGAGTTTGTCTTGCCATAACTGTAACACTCTATGCGATGCCGCCAAAAATGGTTGCGGTGGCATTAGGGTTTTATTACCTCCGCCACCCCATGTTCCGGAACCCAATGCCCTCCGCCACGTTGAACTTTTTCCGGCGACTTCCCAGCCTTTCTGATCGCCTCATGTAG 3072 0.569 MTTPFQQPPQTVRRLVVEVIDARNLLPKDGQGSSSPYVVADFDGQRKRTTTRFKELSPVWNEPLEFIVSDPENMEFEELEVEVYNDKKFGNGSGRKNHFLGRVKLYGTQFSRRGEEALVYYTLEKRSVFSWIRGEIGLRIYYYDEMLMEEDKHPPPQQEEQGERTEQDRNRPPLPQGVVVVEEGRVFEAPGPMEQCMPLPTGPPHSPRVVVVEESPPPVVHVPPDPPLPEMFEAPTSEMQFHPAEVRKMQANRGERVKIMKRPNGDYLPKDISGKKAGNDSERVHPFDLVEPMQYLFVKIWKARGLAHPIEGPIVRVRMSSQSRRSKPASYRPNEPIDSPEWNHVFLLDYNKTTDANTATLEISVWDSPSENFLGGVCFDLSDVPVRDPPDSPLAPQWYRLEGGTADQNPGRVSGDIQLSVWIGTQSDDAFPEAWISDAPYVAHTRSKVYQSPKLWYLRVTVVEAQDLNIAPNLPPLTAPEVRVHVQLGFQSQRTRRGSMNHRSLSFHWNEDLLFVAGEPLEDSVIVLLEDRTTKEPALLGHVEIPLSSIEQRIDERHVAAKWFPLESGPYCGRVYLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAVGILELGILGARGLLPMKSKGGGKGSTDAYCVAKYGKKWVRTRTVTDTFDPRWNEQYTWQVYDPCTVLTVGVFDNWRMFVDVSEDRHDCRIGKVRIRVSTLESNRIYTNSYPLLVLTRTGLKKMGEIELAVRFACPSLLPDTCAVYGQPLLPRMHYLRPLGVAQQEALRGAATKMVAQWLARSEPPLGHEVVRYMLDADSHVWSMRKSKANWFRIVAVLAWAVGVAKWLDDIRRWKNPVTTVLLHILYLVLVWYPDLVVPTGFLYVVLIGIWYYRFRPKIPAGMDTRLSQAEAVDPDELDEEFDTMPSSKPPDVIRMRYDRLRMLAARVQTVLGDFATQGERLQALVSWRDPRATKLFIGVCLAITVTLYAMPPKMVAVALGFYYLRHPMFRNPMPSATLNFFRRLPSLSDRLM 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1545 1023 Gene3D C2 domain 10 172 IPR035892 -
Aed6g1545 1023 ProSiteProfiles C2 domain profile. 436 564 IPR000008 -
Aed6g1545 1023 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 10 1023 - -
Aed6g1545 1023 CDD C2D_MCTP_PRT_plant 612 739 - -
Aed6g1545 1023 ProSiteProfiles C2 domain profile. 276 399 IPR000008 -
Aed6g1545 1023 Gene3D C2 domain 442 581 IPR035892 -
Aed6g1545 1023 PANTHER BNAA10G16860D PROTEIN 10 1023 - -
Aed6g1545 1023 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 611 763 IPR035892 -
Aed6g1545 1023 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 155 IPR035892 -
Aed6g1545 1023 CDD C2C_MCTP_PRT_plant 457 600 - -
Aed6g1545 1023 Pfam C2 domain 611 722 IPR000008 -
Aed6g1545 1023 Pfam C2 domain 456 566 IPR000008 -
Aed6g1545 1023 Pfam C2 domain 295 399 IPR000008 -
Aed6g1545 1023 Pfam C2 domain 14 106 IPR000008 -
Aed6g1545 1023 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 456 602 IPR035892 -
Aed6g1545 1023 ProSiteProfiles C2 domain profile. 594 720 IPR000008 -
Aed6g1545 1023 SMART C2_3c 457 559 IPR000008 -
Aed6g1545 1023 SMART C2_3c 295 393 IPR000008 -
Aed6g1545 1023 SMART C2_3c 612 719 IPR000008 -
Aed6g1545 1023 SMART C2_3c 14 119 IPR000008 -
Aed6g1545 1023 Gene3D C2 domain 289 423 IPR035892 -
Aed6g1545 1023 Pfam Plant phosphoribosyltransferase C-terminal 868 1023 IPR013583 -
Aed6g1545 1023 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 295 441 IPR035892 -
Aed6g1545 1023 CDD C2A_MCTP_PRT_plant 14 144 - -
Aed6g1545 1023 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Aed6g1545 1023 MobiDBLite consensus disorder prediction 152 175 - -
Aed6g1545 1023 MobiDBLite consensus disorder prediction 152 170 - -
Aed6g1545 1023 Gene3D C2 domain 609 745 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1545 Aed-Chr6 19601271 19604342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1545 2 1023 Lipid Metabolism Gene Families AT1G74720 70.230 0.0 1530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1545 - - gmx:100783882 1910.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1545 6 19601271 19604342 Aed6g1545 6 19601271 19604342 ECH