Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1542 ATGGGGAATCTTTTCTGTTGTGTGCAAGTTGATCAATCTACGGTGGCTATAAAAGAAGGATTTGGACGATTTGAGGAGGTGCTTCAGCCAGGATGCCATTGCATGCCATGGTTCCTTGGAAAACAAATTGCTGGTCATCTCTCTCTTCGGCTACAGCAATTGGATATTCGATGTGAGACCAAGACAAAGGATAATGTCTTTGTAAACGTTGTTGCTTCTATTCAATATCGTGCCCTGGCAGAGAAGGCCAGTGATGCTTTTTACAAGCTTAGCAATACAAAGTCTCAAATTCAAGCCTATGTTTTTGATGTAATTAGGGCAAGTGTTCCAAAACTCAACTTGGATGATGCTTTTGAGCAGAAAACTGAAATTGCCAGAGCTGTGGAAGAAGAACTTGAGAAGGCTATGTCAGCTTATGGGTATGAAATTGTTCAAACACTGATTGTTGATATAGACCCTGATGAGCATGTGAAGCGGGCTATGAATGAAATCAATGCTGCTGCAAGATTGAGGGTGGCAGCTAATGAGAAGGCAGAGGCAGAGAAGATCTTGCTAATTAAACGAGCTGAGGGTGAGGCTGAGTCTAAGTATCTCTCCGGGCTTGGTATTGCTCGCCAACGTCAAGCAATCGTGGATGGCTTGAGAGACAGTGTGCTTGGATTCTCAGTTAATGTACCTGGGACAACTGCAAGAGATGTCATGGACATGGTCCTTGTCACTCAGTATTTTGACACAATGAAAGATATTGGTGCCACCTCCAAGTCTTCTGCTGTGTTCATTCCACATGGACCTGGTGCTGTTCGAGATGTAGCTGGTCAAATTCGTGAGGGACTTCTTCAGGCTTCTCATCAGTAG 855 0.4409 MGNLFCCVQVDQSTVAIKEGFGRFEEVLQPGCHCMPWFLGKQIAGHLSLRLQQLDIRCETKTKDNVFVNVVASIQYRALAEKASDAFYKLSNTKSQIQAYVFDVIRASVPKLNLDDAFEQKTEIARAVEEELEKAMSAYGYEIVQTLIVDIDPDEHVKRAMNEINAAARLRVAANEKAEAEKILLIKRAEGEAESKYLSGLGIARQRQAIVDGLRDSVLGFSVNVPGTTARDVMDMVLVTQYFDTMKDIGATSKSSAVFIPHGPGAVRDVAGQIREGLLQASHQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1542 284 SUPERFAMILY Band 7/SPFH domain 46 171 IPR036013 -
Aed6g1542 284 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 283 - -
Aed6g1542 284 Pfam SPFH domain / Band 7 family 9 182 IPR001107 -
Aed6g1542 284 CDD SPFH_like_u4 10 278 - -
Aed6g1542 284 Gene3D Band 7 domain 42 167 IPR036013 -
Aed6g1542 284 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 3 1 283 - -
Aed6g1542 284 Coils Coil 157 177 - -
Aed6g1542 284 SMART PHB_4 5 165 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1542 Aed-Chr6 19592201 19595218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1542 - - gmx:100804982 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1542 6 19592201 19595218 Aed6g1542 6 19592201 19595218 ECH