Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1541 ATGGAAGTGGGGTTTAGTAGTCTCAACTGCATCAATACTTCTCTCCATTCCAGTGTTCCTTCTTGGTTCATACAAGTACAGGACCAAGATTCCAGCAGGAAGCCCCATCACATCCATGTTCTTGTTGCAGCAATATGCAACAACTGCAAAGCCAGGAACTCAAGCAATGTTGTCATAAGCATGGCCACAAGTCCATCCCATCATGCAACTGAAAGGGAAGATGGAGAAGAAAGTGGCAACACTAGAAAAGAGGTTGTTCTAGGCCAAACTCAAACTCTAACAGAGAACCTCAAATTCCTGAACAAAGCAGTGATGGAGCCAGTTCACCCAATGTTAAAGTGCACAACAAAGGAAGTGGAAGAGGTGAAGATTGTGGTAAAGATTCTTCCCATATTCATGTCCACCATAATGCTAAACTGTTGCCTAGCTCAGCTATCAACTTTCTCAGTGCAACAATCAGCCACAATGAACACCATGCTTGGCTCCTTCAAGGTCCCACCAGCATCTCTACCAGTGTTCCCTGTCCTCTTCATCATGATACTTGCCCCACTCTACAACCACATCATTGTCCCATTTGCCAGAAAAGTAACCAGAACTGAAACCGGGATCACACATCTACAAAGAATAGGAACAGGCCTGTTTCTCTCCATTGTGGCAATGGCTGTGGCAGCTTTGGTGGAAACCAAGAGAAAGAAAACAGCTTATATGTTTGGTTTGCAAGACTTGGCAAAACCACTCCCTATAACATTCCTTTGGGTGGCTTTGCAGTACATTTTTCTTGGCTCAGCTGATCTTTTCACATTGGCTGGGATGATGGAGTTTTTCTTCACAGAGGCACCATGGAGCATGAGGTCTTTGGCCACAGCACTCTCATGGGCCTCACTGGCTATGGGGTACTTCCTCAGCACTGTTCTTGTGTCTGTCATCAATAAGGTCACTGGAGCTATTGGACACACACCATGGCTCTTGGGTGCCAACTTGAACCATTATCACCTTGAGAGGTTTTACTGGCTCATGTGTGTGCTTAGTGGACTCAACTTCCTACATTTTCTCTTCTGGGCTTACTCCTACAAATACAGATATTCAACAAAGCCTGGTGGATACTAG 1107 0.4517 MEVGFSSLNCINTSLHSSVPSWFIQVQDQDSSRKPHHIHVLVAAICNNCKARNSSNVVISMATSPSHHATEREDGEESGNTRKEVVLGQTQTLTENLKFLNKAVMEPVHPMLKCTTKEVEEVKIVVKILPIFMSTIMLNCCLAQLSTFSVQQSATMNTMLGSFKVPPASLPVFPVLFIMILAPLYNHIIVPFARKVTRTETGITHLQRIGTGLFLSIVAMAVAALVETKRKKTAYMFGLQDLAKPLPITFLWVALQYIFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWASLAMGYFLSTVLVSVINKVTGAIGHTPWLLGANLNHYHLERFYWLMCVLSGLNFLHFLFWAYSYKYRYSTKPGGY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1541 368 SUPERFAMILY MFS general substrate transporter 137 358 IPR036259 -
Aed6g1541 368 Pfam POT family 22 322 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed6g1541 368 MobiDBLite consensus disorder prediction 67 81 - -
Aed6g1541 368 MobiDBLite consensus disorder prediction 63 82 - -
Aed6g1541 368 Gene3D MFS general substrate transporter like domains 9 364 IPR036259 -
Aed6g1541 368 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 38 362 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed6g1541 368 PANTHER PROTEIN NRT1/ PTR FAMILY 4.7 38 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1541 Aed-Chr6 19587302 19590841 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1541 38 360 Organic Solute Cotransporters AT1G69850 64.438 7.39e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1541 - K14638 gmx:100796577 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1541 6 19587302 19590841 Aed6g1541 6 19587302 19590841 ECH