Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1538 ATGGAAATGAGGACTGTAGCATGGATTTCCTTGGTGATAATGGTGACAGTTTTCTGCCCTTCCTCTCTTGCTCTCACCCAGGATGGTCTGGCGTTGTTGGAAATGAAAAGCACTTTGAATGATACGAAGAATGTTCTGAGCAACTGGCAAGAGTTGGATGAGTCTCCTTGTGCATGGACTGGTATCTCGTGTCATCCTGGTGATGAACAAAGAGTTCGCTCAATAAATCTTCCATTCATGCAACTTGGAGGGATCATATCTCCCAGCATTGGTAAACTCAGTAGACTACAGAGATTGGCACTTCATCAGAACAGTTTGCATGGAACCATTCCTAATGAACTGACCAATTGTACTGAGCTAAGAGCACTGTACTTGAGGGGTAATTATTTCCAAGGAGGCATACCATCAAATATTGGAAATCTTTCATATTTAAATATAATGGATTTATCAAGCAACTCATTAAAAGGTGCTATACCTTCCTCTATTGGCCGTCTCTCACATTTGCATATTCTGAACTTGACTACCAATTTTTTCTCTGGTGAAATTCCCGACATTGGAGTATTAAGCACCTTTGACAAGAGCTCGTTTGTTGGCAATTTAGATCTTTGTGGGCGACAAGTCCAAAAGCCATGTCGGACATCACTTGGTTTCCCTGTGGTGCTACCACATGCTGAAATCCCTACCAAAAGGCCTTCACATTACATGAAGGGGGTGCTAATTGGTGCAATGGCAATTTTGGGTCTCGCACTTGTCATAATCCTTTCATTCCTTTGGTCTCGTTTGTTATCAAAGAAGGAACGAGCAGCAAAGAAATACACAGAAGTCAAGAAACAAGTTGATCCAGAAGCAAGCACAAAACTTATCACCTTCCATGGTGATATGCCATACACATCATCTGAGATCATAGAGAAGCTGGAGTCTCTTGATGAAGAGAATATAGTAGGATCAGGAGGATTTGGTACTGTTTACCAAATGGTGATGAATGACTGTGGTACATTTGCTTTGAACACATTACTGAGAGAAAACAGATTGGAGGACGTTGTAGACAAAAGATGCACTGATGCAGATGCAGGAACTCTTGAAGTAATTCTTGAGCTGGCAGCAAGATGCACTGATGGAAACGCGGATGATCGTCCTTCAATGAACGAGGTGTTGCAGTTGCTTGAACAAGAAGTCATGTCTCCTTGCCCAAGCGAATTTTACGAGTCTCATTCGGATCACTAA 1224 0.4208 MEMRTVAWISLVIMVTVFCPSSLALTQDGLALLEMKSTLNDTKNVLSNWQELDESPCAWTGISCHPGDEQRVRSINLPFMQLGGIISPSIGKLSRLQRLALHQNSLHGTIPNELTNCTELRALYLRGNYFQGGIPSNIGNLSYLNIMDLSSNSLKGAIPSSIGRLSHLHILNLTTNFFSGEIPDIGVLSTFDKSSFVGNLDLCGRQVQKPCRTSLGFPVVLPHAEIPTKRPSHYMKGVLIGAMAILGLALVIILSFLWSRLLSKKERAAKKYTEVKKQVDPEASTKLITFHGDMPYTSSEIIEKLESLDEENIVGSGGFGTVYQMVMNDCGTFALNTLLRENRLEDVVDKRCTDADAGTLEVILELAARCTDGNADDRPSMNEVLQLLEQEVMSPCPSEFYESHSDH 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1538 407 Gene3D Ribonuclease Inhibitor 25 213 IPR032675 -
Aed6g1538 407 PANTHER LRR RECEPTOR-LIKE KINASE 335 407 - -
Aed6g1538 407 PANTHER RECEPTOR-LIKE PROTEIN 55 335 407 - -
Aed6g1538 407 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Aed6g1538 407 SUPERFAMILY L domain-like 25 189 - -
Aed6g1538 407 PANTHER RECEPTOR-LIKE PROTEIN 55 2 335 - -
Aed6g1538 407 Gene3D Transferase(Phosphotransferase) domain 1 250 393 - -
Aed6g1538 407 PANTHER LRR RECEPTOR-LIKE KINASE 2 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1538 Aed-Chr6 19566370 19570214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1538 335 397 Receptor kinase-like Gene Family AT2G35620 44.444 1.09e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1538 - - gmx:100797653 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1538 6 19566370 19570214 Aed6g1538 6 19566370 19570214 ECH