Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1503 ATGGCTTCCGATTCAATCGCCGCCATGCCGATTCCCTCTGCCGCAAACACCAAGAACCCGGGGAAGAAGAAGAGGGTTCGATTTCTATTTCGATTTTCATCTTCGTTTTCAGTTCCATTTCTGACATGCATTCGGTTATTCTTTCTTGTTAATATCATCTCAATCTTCTTGGTATTTCAGACCAACAGGACCGCAAAATTGAAGCAATACAAAATCGATGCCCGCCGCGAGCAATGGTTATCTCAAGGTGCGGTGAAGAGCAAGGGGTGCAAGAACGGAGTGGACGATGACGGCCACGCGCCGCCTTTGCCGGCGGTGAAACACGGCAAGCACTCGTTGGAGCCGTTGAACACGAGGGGAAGAGGCGAAGAGGACGATGGACTGATCCATCACGACAGCGATTCGGAGTCTCCCACCAACTGTGCCGCCAGCGTGTTGTGCGGCACCGATTCGGGGACAAATTTCACCGGAAGCAGCAGCAGCGGCGGTAGCAGCAGCAGCAGTAGCAGCAGTTCCAGCAGCGGCGGGTGCTGTTCCGGGAACGTCACCGAGGCGGAGGAAGAAGAAGAAGAAGATGATGATGGATGCTTGGATGATTGGGAGGCTATGGCAGATGCTTTAGCGGCCGATGACAAGCGTGAAAACCCTTGTCCGGATTCGCCCCCGGTGGTTTCGCCTTCAGAGGGTTTGAATTCGCAAGCCGAGAGTGGTCGAATGGTTCCTTGGGGCTCTGGTAATACCCGAGCGTGGAGGGCCGATGACGCCTTTCGCCCTCAGAGTTTGCCCAATTTATCTAAGCAGCACAGTATGCCAAACCCTGATCGGCGTGGGGTCCCTTGGGGCCGCATCCCCACTCCATCCTCGTGTCCAATTTGTTGCGAGGATCTCGATTTGACGGACACAAGTTTCATGCCCTGTCTCTGTGGGTTTAGGCTTTGCCTCTTTTGCCACAAGAGGATTCTCGAGGAGGATGGGCGTTGCCCCGGGTGTAGGAAGTGCTATGAGTGTGAGCCTGTTGAGACAGAGGCGAGTGTGCTTGGAGGCAGCCTCACTCTTCGGTTGCCACGTTCATGCAGCATGATCGAGAGGTCTTGA 1095 0.547 MASDSIAAMPIPSAANTKNPGKKKRVRFLFRFSSSFSVPFLTCIRLFFLVNIISIFLVFQTNRTAKLKQYKIDARREQWLSQGAVKSKGCKNGVDDDGHAPPLPAVKHGKHSLEPLNTRGRGEEDDGLIHHDSDSESPTNCAASVLCGTDSGTNFTGSSSSGGSSSSSSSSSSSGGCCSGNVTEAEEEEEEDDDGCLDDWEAMADALAADDKRENPCPDSPPVVSPSEGLNSQAESGRMVPWGSGNTRAWRADDAFRPQSLPNLSKQHSMPNPDRRGVPWGRIPTPSSCPICCEDLDLTDTSFMPCLCGFRLCLFCHKRILEEDGRCPGCRKCYECEPVETEASVLGGSLTLRLPRSCSMIERS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1503 364 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 60 362 IPR039780 GO:0004842|GO:0030014
Aed6g1503 364 MobiDBLite consensus disorder prediction 1 20 - -
Aed6g1503 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 345 IPR013083 -
Aed6g1503 364 MobiDBLite consensus disorder prediction 112 133 - -
Aed6g1503 364 MobiDBLite consensus disorder prediction 89 143 - -
Aed6g1503 364 CDD mRING-HC-C4C4_CNOT4 289 332 IPR039515 -
Aed6g1503 364 MobiDBLite consensus disorder prediction 156 180 - -
Aed6g1503 364 ProSiteProfiles Zinc finger RING-type profile. 289 331 IPR001841 -
Aed6g1503 364 MobiDBLite consensus disorder prediction 156 195 - -
Aed6g1503 364 MobiDBLite consensus disorder prediction 225 240 - -
Aed6g1503 364 Pfam RING/Ubox like zinc-binding domain 289 335 - -
Aed6g1503 364 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 60 362 - -
Aed6g1503 364 MobiDBLite consensus disorder prediction 211 241 - -
Aed6g1503 364 SUPERFAMILY RING/U-box 285 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1503 Aed-Chr6 19260759 19264810 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1503 - - gmx:100796324 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1503 6 19260759 19264810 Aed6g1503 6 19260759 19264810 ECH