Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1495 ATGGAACGCACCACATCCTTCAACGACTCCTCCAACAACAGCAGCAGCATCTCTTCACAACGCAGCTTAGCCTCAGTCCCTTCCCTAAACTCACACGCTCACCTCCTCTTCACTCCTTCCAGTTCAGCCTCGCACACGTGCCTCACCACTCTCAAATCCCAAACCTACATCTCCTCCCTCACCCTCGCCGGCAAGTTCCTCTACGCCGGCTCCTCCGACAGACAAATCACATCCTGGAACCACACCCATCTAACCAACAACAACAACGACGACGAAAGCAACGTTGTAATAATCGCAGGAAAAGGCGCTGTGAAGTCTATAGTAGTCCACTCCGACAAACTCTTCACCGCCCACCAAGACAACAAAATCCGCGTCTGGAAACTCGTGCATCAAAAGTACACACGTGTGACCACACTCCCCACGCTCGCCGACCGCGTCGCCAAAATCTTCATCCCGAAAAACCACGTGCAGATTCGCCGCCACAAAAAGTGCACGTGGGTCCACCACGTCGACACCGTCTCCTCCCTCGCCCTGTCCCAAGACGGAAACTTCTTATACTCCGTTTCATGGGACAGAACAATTAAAATTTGGCGCACCAAAGACTACGCGTGCTTGGAGTCCGTGCGCGACGCACACAACGATGCGATCAACGCGGTCGCGGTTTCTTACGATGGGCACGTCTACACCGGATCCGCGGACAAGAGAATCAAGGTTTGGAAAAAACACCAAGGCGACAAGAAACACTCCCTAGTCGACACGTTGGAGAAACACAACTCTGGGATTAACGCGTTGGCGCTCAGCGCCGATGGCTCTGTGTTATATTCTGGTGCATGCGATAGGTCAATACTGGTTTCGGAGAAGGGTCAAAATGGTAAATTATTAGTGGTTGGTGCTTTGAGAGGGCACACTAGGTCTATTCTGTGTTTGGCGGTGGTTTCGGATTTGGTATGCAGTGGTTCGGAGGACAAAACGGTGCGTATTTGGAGAGGGGTTCAGAAGGAGTATTCGTGTTTAGCTGTTTTGGAAGGGCATAAGAGTCCGATTAAGAGCTTAACTGCAGCGGTTGATCGTAGTAGTGAAGACCCTTCGGAAGCATCTTTTCTTGTCTATAGCGCCAGTTTGGACTGTGATGTTAAAGTTTGGCAGGTTTTTCTTCCTCTTCTTTCAACTTAA 1173 0.5081 MERTTSFNDSSNNSSSISSQRSLASVPSLNSHAHLLFTPSSSASHTCLTTLKSQTYISSLTLAGKFLYAGSSDRQITSWNHTHLTNNNNDDESNVVIIAGKGAVKSIVVHSDKLFTAHQDNKIRVWKLVHQKYTRVTTLPTLADRVAKIFIPKNHVQIRRHKKCTWVHHVDTVSSLALSQDGNFLYSVSWDRTIKIWRTKDYACLESVRDAHNDAINAVAVSYDGHVYTGSADKRIKVWKKHQGDKKHSLVDTLEKHNSGINALALSADGSVLYSGACDRSILVSEKGQNGKLLVVGALRGHTRSILCLAVVSDLVCSGSEDKTVRIWRGVQKEYSCLAVLEGHKSPIKSLTAAVDRSSEDPSEASFLVYSASLDCDVKVWQVFLPLLST 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1495 390 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 166 197 - -
Aed6g1495 390 ProSiteProfiles Trp-Asp (WD) repeats profile. 209 249 IPR001680 GO:0005515
Aed6g1495 390 Gene3D - 216 386 IPR015943 GO:0005515
Aed6g1495 390 CDD WD40 47 382 - -
Aed6g1495 390 ProSiteProfiles Trp-Asp (WD) repeats profile. 299 328 IPR001680 GO:0005515
Aed6g1495 390 PRINTS G protein beta WD-40 repeat signature 316 330 IPR020472 -
Aed6g1495 390 PRINTS G protein beta WD-40 repeat signature 227 241 IPR020472 -
Aed6g1495 390 PRINTS G protein beta WD-40 repeat signature 185 199 IPR020472 -
Aed6g1495 390 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 299 328 - -
Aed6g1495 390 SUPERFAMILY WD40 repeat-like 54 383 IPR036322 GO:0005515
Aed6g1495 390 PANTHER MYOSIN HEAVY CHAIN KINASE B-LIKE PROTEIN 1 390 - -
Aed6g1495 390 SMART WD40_4 201 240 IPR001680 GO:0005515
Aed6g1495 390 SMART WD40_4 247 286 IPR001680 GO:0005515
Aed6g1495 390 SMART WD40_4 292 329 IPR001680 GO:0005515
Aed6g1495 390 SMART WD40_4 159 198 IPR001680 GO:0005515
Aed6g1495 390 SMART WD40_4 90 127 IPR001680 GO:0005515
Aed6g1495 390 SMART WD40_4 334 382 IPR001680 GO:0005515
Aed6g1495 390 SMART WD40_4 44 80 IPR001680 GO:0005515
Aed6g1495 390 Pfam WD domain, G-beta repeat 251 283 IPR001680 GO:0005515
Aed6g1495 390 Pfam WD domain, G-beta repeat 336 381 IPR001680 GO:0005515
Aed6g1495 390 Pfam WD domain, G-beta repeat 167 197 IPR001680 GO:0005515
Aed6g1495 390 Pfam WD domain, G-beta repeat 297 328 IPR001680 GO:0005515
Aed6g1495 390 Pfam WD domain, G-beta repeat 205 240 IPR001680 GO:0005515
Aed6g1495 390 Gene3D - 3 215 IPR015943 GO:0005515
Aed6g1495 390 ProSiteProfiles Trp-Asp (WD) repeats profile. 166 207 IPR001680 GO:0005515
Aed6g1495 390 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 1 390 IPR045182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1495 Aed-Chr6 19221185 19222357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1495 104 382 Acyl Lipid Metabolism Gene Families AT3G18860 25.267 4.54e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1495 - - gmx:100801906 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1495 6 19221185 19222357 Aed6g1495 6 19221185 19222357 ECH