Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1494 ATGCTGCTGAGTACTAGTAACTTACAGTTTTCTCCGTGGACTTTCTTCAAACACCTTACGAGACGGAAATTCAAATTAACACCACCACTCTGTCAGCACAAATCAGTATCCACTCTCTCCCACTTCGGAACGCTAACCCCCCGCCAGAAAGACCAGATTCATCTCTACGTCGACACTCTTCTTCAATGGAACAAGCGCATGAATCTCACCGCGGTTAGAGAGGTCAATGAAGTGATGGAACGCCACGTGGAGGACTCCCTCGCGATTTTGCCTCCGCTGAGCGACTGTTACCGCTCGCACTGCGGCGCTTCGTGCGATAAGCTCAGTCTCGTCGATGTCGGAACCGGTGCTGGCCTTCCCGGAGTAGTTTTAGCCATAGCTTGCCCAGAGTGGGATGTAACGCTGATGGAGTCTATGAACAAGCGATGCGTCTTCTTGGAGCACGTTGTAGGTGTTATCGGTTCCTCAAATATTCAAATTGTAAGAGGAAGAGCAGAGAGTTTAGGGCAGAATCCTTGCTTCAGGGAGCAATTTGACGTAGCAGTGGCCAGGGCGGTTGCAGAAATGAGAATATTAGCTGAATATTGTCTTCCTATGGTTCGTGTCGGTGGGTTGTTTATTGCTGCCAAGGGGCATGATCCTGAGGATGAAATTAAGAGAGCTGAAAGTGCCATCCAGAAGGTGGGTGCATCTCTATTGCAAGTATGCTCAGTGGAATCGCAAAGTCCATATGGTCAGCGAACTGCTGTCATATGTTCAAAGGATCGTCCTACCCCAATGAAATATCCCCGTGATCCAGCCATTCCTATTACTCTTCTTGACCCAACGTGA 831 0.4898 MLLSTSNLQFSPWTFFKHLTRRKFKLTPPLCQHKSVSTLSHFGTLTPRQKDQIHLYVDTLLQWNKRMNLTAVREVNEVMERHVEDSLAILPPLSDCYRSHCGASCDKLSLVDVGTGAGLPGVVLAIACPEWDVTLMESMNKRCVFLEHVVGVIGSSNIQIVRGRAESLGQNPCFREQFDVAVARAVAEMRILAEYCLPMVRVGGLFIAAKGHDPEDEIKRAESAIQKVGASLLQVCSVESQSPYGQRTAVICSKDRPTPMKYPRDPAIPITLLDPT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1494 276 Hamap Ribosomal RNA small subunit methyltransferase G [rsmG]. 42 251 IPR003682 GO:0005737|GO:0006364|GO:0008649
Aed6g1494 276 Gene3D Vaccinia Virus protein VP39 31 271 IPR029063 -
Aed6g1494 276 Pfam rRNA small subunit methyltransferase G 50 239 IPR003682 GO:0005737|GO:0006364|GO:0008649
Aed6g1494 276 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 269 IPR003682 GO:0005737|GO:0006364|GO:0008649
Aed6g1494 276 TIGRFAM rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 55 250 IPR003682 GO:0005737|GO:0006364|GO:0008649
Aed6g1494 276 CDD AdoMet_MTases 110 207 - -
Aed6g1494 276 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 41 266 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1494 K03501 - gmx:100818428 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1494 6 19215477 19218025 Aed6g1494 6 19215477 19218025 ECH