Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1485 ATGGGAGATAACAAGCGTAAGAGAGGACGCAAACCCAAAAACCCCTCCCCCGAAACCCTAGACCACCCCGCCGCTAACTCCGTCTCCACCTCCATGGACGACGTCTTCTCCGTCGGCAACGTCGAGCTCATCGACACCACCGCCTCTCCTCACCTCCGCCGCCTCCGCGGCCGCCCAAACCACTCCGACAAGCCCCACGCTCTCCCCACCGCCCGCCGCCACGCCCGCCCCCTCGACAATGGCGGCGGGGACTTCTCGGTCCCGGCCGACCTTGCCGAGGCCATGGAGGAGGACCCCGCTGCGTGGGAGGCAAGGGCGCTGCCGGCGATGGACTCGGTGGTGAAGGTTTTCTGCGTCCACACGGAGCCGAATTTCTCGCTTCCGTGGCAGAGGAAGAGGCAATACAGCTCGAGCAGTAGCGGGTTTGTGATTGCCGAGAGAAGGGTTCTCACCAATGCGCATTCCGTGGAACACTACACGCAGGTCAAGCTCAAGAAACGTGGCTCTGATACTAAGTACTTGGCTACTGTGCTCGCCATTGGAACCGAATGTGACATTGCCATGCTTACAGTTGATGATGATGAGTTCTGGCAAGGGATGTCACCTGTAGAGTTTGGGGAATTACCCACACTTCAAGACGCAGTTACTGTTGTGGGCTACCCAATTGGTGGAGACACTATCTCTGTGACCAGTGGTGTTGTATCACGCATTGAGATTCTATCTTATGTCCATGGTTCTACCGAACTTCTAGGTTTACAGATAGATGCTGCAATAAATTCTGGTAATTCTGGTGGACCTGCATTTAATGATAAAGGAAACTGTGTGGGGATTGCATTTCAGTCCCTCAAGCACGAAGATGTGGAGAATATAGGTTATGTCATTCCAACACCAGTTATCATGCATTTCATCCAGGATTATGAGAAGAATGGAGGATATACTGGATTCCCAATCCTTGGGGTTGAGTGGCAGAAAATGGAAAATCCTGATCTGCGAATGGCAACGGGCATGAAACCTGATCAGAAAGGTGTGCGCATTAGAAGAATTGATCCTACTGCCCCAGAATCTAAGGTTTTGAAGCCATCAGATGTTATCCTTAGTTTTGATGGGGTTGATATTGCCAATGATGGAACAGCCATCAAAGTACTGAGAAATTCAGACATTTTCAAATTTGATATTAAACTTGGTAGTCACAGAAGGCTTATTCCAGCACACAGCAAGGGCAAGCCTCCCTCATATTATATCATTGCTGGATTTGTTTTCTCAACTGTTTCAGTTCCATATCTTCGTTCCGAGTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGCTGCATTCGATGCCACAATCACCAGATGAACAACTTGTTGTGGTATGCTTTGTGTTAGTCTTTCTTTCTGCTGTTTCTCCTAAAGACCTTGTGAAGTCTGATTATCTCTTTGACACATTAAAGGTGCTAGTGGCTGATATCAACATTGGATATGAAGATATTGTCAACACTCAGATCCTTGCTTTTAATGGTCAACCAGTGAAAAACCTGAAGAGCTTGGCCACTATGGTAGAGAGCTGCAATGATGAATATCTAAAATTTGATCTAGATTATGATCAGATTGTGGTGCTTCGCACAAAGACTGCAAAAGCAGCTACTCTTGATATTCTTGCAACACATTGTATTCCATCAGCGATGTCTGATGATCTTAAGTCATGA 1722 0.4768 MGDNKRKRGRKPKNPSPETLDHPAANSVSTSMDDVFSVGNVELIDTTASPHLRRLRGRPNHSDKPHALPTARRHARPLDNGGGDFSVPADLAEAMEEDPAAWEARALPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIAERRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPVEFGELPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGGYTGFPILGVEWQKMENPDLRMATGMKPDQKGVRIRRIDPTAPESKVLKPSDVILSFDGVDIANDGTAIKVLRNSDIFKFDIKLGSHRRLIPAHSKGKPPSYYIIAGFVFSTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQLVVVCFVLVFLSAVSPKDLVKSDYLFDTLKVLVADINIGYEDIVNTQILAFNGQPVKNLKSLATMVESCNDEYLKFDLDYDQIVVLRTKTAKAATLDILATHCIPSAMSDDLKS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1485 573 PANTHER PROTEASE DO-LIKE 9 4 377 - -
Aed6g1485 573 PANTHER PROTEASE DO-LIKE 9 378 572 - -
Aed6g1485 573 MobiDBLite consensus disorder prediction 1 30 - -
Aed6g1485 573 PANTHER - 4 377 - -
Aed6g1485 573 CDD PDZ_serine_protease 316 387 - -
Aed6g1485 573 Pfam PDZ domain 401 468 IPR041517 -
Aed6g1485 573 Pfam PDZ domain 489 570 IPR041517 -
Aed6g1485 573 Gene3D - 487 573 IPR046449 -
Aed6g1485 573 Gene3D - 401 474 IPR046449 -
Aed6g1485 573 Gene3D - 311 400 IPR036034 GO:0005515
Aed6g1485 573 MobiDBLite consensus disorder prediction 61 79 - -
Aed6g1485 573 Gene3D - 197 308 IPR043504 -
Aed6g1485 573 SUPERFAMILY PDZ domain-like 286 384 IPR036034 GO:0005515
Aed6g1485 573 SUPERFAMILY Trypsin-like serine proteases 108 310 IPR009003 -
Aed6g1485 573 Gene3D - 91 196 IPR043504 -
Aed6g1485 573 MobiDBLite consensus disorder prediction 49 87 - -
Aed6g1485 573 Pfam Trypsin-like peptidase domain 140 277 - -
Aed6g1485 573 PRINTS HtrA/DegQ protease family signature 169 189 IPR001940 GO:0004252|GO:0006508
Aed6g1485 573 PRINTS HtrA/DegQ protease family signature 141 153 IPR001940 GO:0004252|GO:0006508
Aed6g1485 573 PRINTS HtrA/DegQ protease family signature 211 235 IPR001940 GO:0004252|GO:0006508
Aed6g1485 573 PRINTS HtrA/DegQ protease family signature 248 265 IPR001940 GO:0004252|GO:0006508
Aed6g1485 573 PRINTS HtrA/DegQ protease family signature 357 369 IPR001940 GO:0004252|GO:0006508
Aed6g1485 573 PANTHER - 378 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1485 Aed-Chr6 19134744 19140330 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1485 K25897 - gmx:100817187 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1485 6 19134744 19140330 Aed6g1485 6 19134744 19140330 ECH