Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1453 ATGCTGAGAGTGGGCGCAAAGAGGGTTTTGGAAACGACGTCGCTTGGCGTTAGGGTTCCGGTGCGGTTGTACCACGAGAGGGTTGTGGATCACTACGACAATCCGCGGAACGTTGGATCGTTCGACAAGAACGACCCGAGCGTGGGGACGGGTTTGGTGGGGGCGCCGGCGTGCGGCGACGTCATGAAGCTCCAGATTAAGGTCGACGACAAAACCGGAAAAATCGTCGATGCGAGATTCAAGACTTTCGGCTGTGGCTCCGCCATTGCTTCTTCCTCCGTCGCTACTGAGTGGGTGAAGGGAAAGCAAATGGAGGAAGTTCTCTCCATAAAAAATACTGAAATTGCAAAACATCTTTCACTTCCACCAGTTAAGCTCCACTGCAGCATGCTTGCTGAAGATGCCATTAAAGCAGCCGTTAAAGACTATGAAGCTAAGCGTGCTAAGGCAGCTGCAACAGGAGAGAATCCAGCCGCTGCATGA 483 0.528 MLRVGAKRVLETTSLGVRVPVRLYHERVVDHYDNPRNVGSFDKNDPSVGTGLVGAPACGDVMKLQIKVDDKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKAAATGENPAAA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1453 160 TIGRFAM iscU: FeS cluster assembly scaffold IscU 24 147 IPR011339 GO:0005506|GO:0016226|GO:0051536
Aed6g1453 160 SUPERFAMILY SufE/NifU 23 147 - -
Aed6g1453 160 Pfam NifU-like N terminal domain 24 149 IPR002871 GO:0005506|GO:0016226|GO:0051536
Aed6g1453 160 CDD IscU_like 23 139 IPR002871 GO:0005506|GO:0016226|GO:0051536
Aed6g1453 160 Gene3D - 23 159 - -
Aed6g1453 160 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 16 158 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1453 Aed-Chr6 18850172 18851721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1453 K22068 - gmx:100812566 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1453 6 18850172 18851721 Aed10g0937 10 7951907 7954266 PCT