Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1448 ATGCAATCGTTATCGTTAAGTATGATGAGTCTGAAAAGTAGTAGTTTAGCGAATTTTCTCTTGCTGGGTTCGGAGGCGAGACTCAGAAGAAGGAGTATCATTGTAGCGTGTGCTTCGGAGGGTAGCAGTAGCAGTAGTAGCACCAGCTCCTTTCTCTCTCGGACTCAAACCTACGCTCTCCTTAAGCAACAATTGCAAGTGGCTGCTAAATCCGAGGATTACAAGGAAGCAGCTAGAATTCGAGACTCGTTAAAGCTATTCGAGGAAGAGGAACCGGTGTTGCGTCTCAGGAGACTACTGAAGGAAGCAGTTGCTGAAGAGAGATTCCAGGATGCTGCTAGTTATCGTGATGAGCTAAACAAAATTGCCCCACACTCTCTTTTAAAATGTTGCAGTGATGCTACAACATTGGGAATCAGGGTTCAAGTTAGGAGTGTATATATAGAGAGCAGAAGTCAGCCTTCGAAGGGACTATACTTCTTTGCATATAGAATAAGAATTACCAATAACTCAGATCACCCTGTTCAACTTCTTAGAAGGCATTGGATTATAACTGATGCTAATGGGAAAACGGAAAATGTCTGGGGAATTGGAGTTGTTGGCGAACAGCCATTAATACTTCCTGGGAATAGTTTCGAATACTCTTCAGCATGCCCACTGAACACGCCAAATGGTAGAATGGAAGGTGACTATGAGATGATCCATGTTGAAAGAGAAGGCTCGCGATCATTCAATGTGGCCATTGCCCCGTTTTCTCTCTCTCTGCTTGGAGATGATGAAGGTTCTACTATTTGA 795 0.4365 MQSLSLSMMSLKSSSLANFLLLGSEARLRRRSIIVACASEGSSSSSSTSSFLSRTQTYALLKQQLQVAAKSEDYKEAARIRDSLKLFEEEEPVLRLRRLLKEAVAEERFQDAASYRDELNKIAPHSLLKCCSDATTLGIRVQVRSVYIESRSQPSKGLYFFAYRIRITNNSDHPVQLLRRHWIITDANGKTENVWGIGVVGEQPLILPGNSFEYSSACPLNTPNGRMEGDYEMIHVEREGSRSFNVAIAPFSLSLLGDDEGSTI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1448 264 Pfam UvrB/uvrC motif 95 122 IPR001943 GO:0005515
Aed6g1448 264 Hamap Protein ApaG [apaG]. 132 260 IPR023065 -
Aed6g1448 264 ProSiteProfiles UVR domain profile. 55 90 IPR001943 GO:0005515
Aed6g1448 264 Pfam ApaG domain 150 234 IPR007474 -
Aed6g1448 264 SUPERFAMILY ApaG-like 135 254 IPR036767 -
Aed6g1448 264 Gene3D ApaG domain 129 259 IPR036767 -
Aed6g1448 264 PANTHER OS05G0170800 PROTEIN 38 260 - -
Aed6g1448 264 ProSiteProfiles ApaG domain profile. 133 260 IPR007474 -
Aed6g1448 264 ProSiteProfiles UVR domain profile. 90 125 IPR001943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1448 Aed-Chr6 18816665 18819818 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1448 - K06195 gmx:100782176 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1448 6 18816665 18819818 Aed6g1448 6 18816665 18819818 ECH
Aed6g1448 6 18816665 18819818 Aed10g0931 10 7870164 7872749 PCT