Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1433 ATGCCATCAACAGTGAGGGATCACGGGATTGTTCGGAGGATAATGGGCTTTATAGGAAGAGGAGGAAGAAGAAGAAGAAACCATCACGCAAATTTTCCATTGCAGCCTCAAGAGAATAACCATGTTCCACAGCCACATCATGGCCAAGTAGTAGTTCAAGAAGAGTGGAGTTTTCTGGAGAGTTTTGAGCAGCAACATGGCACCAAACACCCTTTCTTCTACGGTTGCCGTTTCGCAGAAGCAGTGAAGTTGGCTGAGCAAGACCACAAGCTCTTGTTCATGTACCTCCACTCACCTGACCACCCTTTTGCAAGCGTGTTCTGCAAGGAAACGCTGTGCTCCGATCCGGTAATCCAGTTTCTTGACGTGAATTTTGTCTGCTGGGGTGGACTTGCAGATAGAGGGGAGGGTGTGCAAATGGTTGCAACATTAGGCCCTGCTACATTTCCTTGTTGTGCTGTCATAGCCCCTGCTCCTGGTGAGAGCATGGCAGTGCTGCAACAGCTAGAGGGACCCCTTTCACCAGCTGAGCTAGTGGGGATTCTGCAAAGAACATTGGAGGAACAAGGGGAAAAAGACAAACACAATAATAATTGGCCTCCAAGAGATAGAGTTCACAACCCGGTGGAAGCTCACAACAACAGAAATTATGGGAAATTGATGAACAATTCTATCAATGACACTAAACATAACAACAAAATGAATGAGTCCAATAAAGAAAAGCAAGACAAGGGAATACTCATAAGGTTTCCAAACGGGGAAAGAAGAGAGCATACTTTTCTTTACACAGACAAAATCCAATCCATTTTCTCATACATTGATTCATTAGGTTTGCCAGGGATTGGGAGCTACAGATTGATATCAAACTTTCCAAGAAGAGCTTATGGTGTTGATCAAATGAGAATGACTCTCAAAGAGGCTGGCTTGTATCCTAAAGCTACTGTTTTCCTGGAGCCTTTAGGAACTAGAGTCCCATAA 978 0.4458 MPSTVRDHGIVRRIMGFIGRGGRRRRNHHANFPLQPQENNHVPQPHHGQVVVQEEWSFLESFEQQHGTKHPFFYGCRFAEAVKLAEQDHKLLFMYLHSPDHPFASVFCKETLCSDPVIQFLDVNFVCWGGLADRGEGVQMVATLGPATFPCCAVIAPAPGESMAVLQQLEGPLSPAELVGILQRTLEEQGEKDKHNNNWPPRDRVHNPVEAHNNRNYGKLMNNSINDTKHNNKMNESNKEKQDKGILIRFPNGERREHTFLYTDKIQSIFSYIDSLGLPGIGSYRLISNFPRRAYGVDQMRMTLKEAGLYPKATVFLEPLGTRVP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1433 325 MobiDBLite consensus disorder prediction 189 210 - -
Aed6g1433 325 MobiDBLite consensus disorder prediction 189 242 - -
Aed6g1433 325 SUPERFAMILY Thioredoxin-like 53 190 IPR036249 -
Aed6g1433 325 SMART ubx_3 236 319 IPR001012 GO:0005515
Aed6g1433 325 MobiDBLite consensus disorder prediction 216 231 - -
Aed6g1433 325 Gene3D Glutaredoxin 44 196 - -
Aed6g1433 325 PANTHER FAS-ASSOCIATED PROTEIN 7 190 - -
Aed6g1433 325 Gene3D - 240 319 - -
Aed6g1433 325 PANTHER FAS-ASSOCIATED PROTEIN 191 319 - -
Aed6g1433 325 CDD UAS 78 188 - -
Aed6g1433 325 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 7 190 - -
Aed6g1433 325 PANTHER UBIQUITIN-ASSOCIATED (UBA) PROTEIN-RELATED 191 319 - -
Aed6g1433 325 SUPERFAMILY Ubiquitin-like 237 320 IPR029071 -
Aed6g1433 325 MobiDBLite consensus disorder prediction 23 42 - -
Aed6g1433 325 Pfam UBX domain 239 318 IPR001012 GO:0005515
Aed6g1433 325 CDD UBX 246 318 - -
Aed6g1433 325 SMART 45neu3 57 183 IPR006577 -
Aed6g1433 325 ProSiteProfiles UBX domain profile. 246 317 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1433 Aed-Chr6 18731761 18734413 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1433 K18726 - gmx:100775212 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1433 6 18731761 18734413 Aed6g1433 6 18731761 18734413 ECH