LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed6g1417	ATGGTCTTAGTTCCACAAAAGGTGACGCCTCTTCCTTCTGAACCTGCTTCCACTCATGCCCTTCCTCCTAAAGGAATCAGTACAATGGCTAGGACTCAATCAAGCCACCCTTTGGACCCTTTATCAGCACCTGAAATCTCTGTAGCAGTGGCAACTGTGAGGGCAGCTGGAGCAACTCCTGAGCTCAGAGACAGTATGCGGTTTATTGAAGTAGTTTTGTTGGAACCAGATAAACATGTTGTTGCACTGGCAGATGCTTATTTCTTTCCACCTTTCCAATCATCATTACTTGCTAGAACTAATAAAGGAGGTGCAGTAATTCCAAGTAAACTCCCTCCAAGACGCGCTAGACTTGTTGTTTACAATAAGAAGACAAATGAGACTAGTATATGGATTGTTGAATATTCACAAGTTCATGCAGTAACTCGAGGAGGTCATCACCGTGGAAAACTCATTTCATCACACGTTGTTCCAGATGTTCAGCCTCCAATGGATGCTATGGAGTATGCAGATTGTGAAGCTGTTGTTAAAGATTTCCCTCCATTTAGAGAGGCTATGAAGAAAAGGGGCATTGAAGACATGGACCTTGTAATGGTTGATGCCTGGTGTGTTGGTTATTACAGTGAAGCTGATGGTCCTAACCGTAGACTCACTAAGCCATTTATATTTTCCCGAGCCGAAAGTGACTGCCCTATGGAAAATGGCTATGCACGCCCAGTTGAGGGAATCTATGTGCTTGTTGATATGCAAAACATGGTTGTTATTGAATTTGAAGACCGTAAATTTGTTCCTCTGCCTCCAGTTGATCCCTTGAGGAACTATACATATGGTGAAACAAGAGGTGGATCTGATAGAAGTGATATAAAACCCTTGCAAATTACTCAGCTTGAAGGTCCAAGCTTTCGTGTCGATGGATCTTATGTTGCATGGCAAAAGTGGAACTTTCGTGTTGGATTCACACCTAGAGAAGGTTTGGTTATACATTCGGTTGCATATGTTGATGGTAGTCAAGGGAGAAGGCCTGTTGCTCATAGACTGAGTTTTGTGGAGATGGTTGTGCCCTATGGAGATCCAAATGAACCACATTACAGAAAAAATGCTTTTGATGCTGGGGAAAATGGCTTGGGGAAAAATGCACATTCTCTCAAGAAGGGGTGTGATTGTTTGGGCTACATCAAGTACTTTGATGCTCATTTCACAAATTTCACTGGTGGAGTTGAGACAATTGAAAATTGTGTATGTTTGCACGAAGAGGATCATGGAATTCTGTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCTAGAAGACTTTCAGTTTCTTTTATGTGTACTGTGGCTAACTATGACTATGGATTTTTTTGGTACTTCTATCAGGCAAATGGTGGTGTGTTATTCCAGGATGGAAAAATTGAAGCTGAGGTTAAGCTAACTGGAATTCTAAGCTTAGGAACCTTTTTACCTGGAGAGTTTCGTAAATATGGAACCATGATTGCGCCAGGTCTATATGCTCCAGTTCACCAACACTTTTTTGTAGCTCGCATGGATATGGCTGTGGATTCTAAACCTGGTGATGCTTTGAATCAGGTCGTGGAGATCAATGTGAAAGTTGAGGAACCAGGGGAGAATAATGTTCACAATAATGCATTTTATGCTGAAGAGACTCTACTCAGATCCGAATTGGAAGCCATGCGTGATTGCAATCCTTTGACTGCTCGACATTGGATTGTTAGGAACACGAGAATATGCAATAGAACAGGACAGTTGACAGGCTATAAGCTAGTACCTGGCTCAAATTGCTTACCATTGGCAGGTTCTGAGGCCAAGTTTTTAAGAAGAGCTGATTTCTTGAGACATAATCTTTGGGTAACACCCTATTCACACGATGAAATGTTTCCTGGAGGAGAATTTCCTAATCAAAATCCACGTGTCAGCCAAGGACTAGCTTCATGGGTTAAGCAAAACCGATCTTTGGAAGAAACTGATTTAGTTCTTTGGTATGTATTTGGAATCACACACGTCCCTCGTTTGGAAGACTGGCCAGTTATGCCAGTAGAACGCATCGGTTTTATGCTTATGCCTCATGGATTCTTCAACTGTTGTGGTGCAGTAGATGTCCCTCCTAGACCATGTGAGTTGGATTATAAAGAAAATGACATGAAGGATTCTGAGAAGGAAATAGAGGGTGGTGTATTAGTGGCAAAACTGTAG	2223	0.422	MVLVPQKVTPLPSEPASTHALPPKGISTMARTQSSHPLDPLSAPEISVAVATVRAAGATPELRDSMRFIEVVLLEPDKHVVALADAYFFPPFQSSLLARTNKGGAVIPSKLPPRRARLVVYNKKTNETSIWIVEYSQVHAVTRGGHHRGKLISSHVVPDVQPPMDAMEYADCEAVVKDFPPFREAMKKRGIEDMDLVMVDAWCVGYYSEADGPNRRLTKPFIFSRAESDCPMENGYARPVEGIYVLVDMQNMVVIEFEDRKFVPLPPVDPLRNYTYGETRGGSDRSDIKPLQITQLEGPSFRVDGSYVAWQKWNFRVGFTPREGLVIHSVAYVDGSQGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGENGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFMCTVANYDYGFFWYFYQANGGVLFQDGKIEAEVKLTGILSLGTFLPGEFRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGDALNQVVEINVKVEEPGENNVHNNAFYAEETLLRSELEAMRDCNPLTARHWIVRNTRICNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRADFLRHNLWVTPYSHDEMFPGGEFPNQNPRVSQGLASWVKQNRSLEETDLVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCCGAVDVPPRPCELDYKENDMKDSEKEIEGGVLVAKL	740

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed6g1417	740	SUPERFAMILY	Amine oxidase N-terminal region	34	162	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Aed6g1417	740	PANTHER	AMINE OXIDASE	23	727	-	-
	Aed6g1417	740	Pfam	Copper amine oxidase, enzyme domain	291	704	IPR015798	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Aed6g1417	740	MobiDBLite	consensus disorder prediction	1	38	-	-
	Aed6g1417	740	Gene3D	-	24	164	-	-
	Aed6g1417	740	SUPERFAMILY	Amine oxidase N-terminal region	161	278	IPR016182	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Aed6g1417	740	PANTHER	COPPER AMINE OXIDASE	23	727	IPR000269	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Aed6g1417	740	Gene3D	-	167	269	-	-
	Aed6g1417	740	Gene3D	Copper amine oxidase, catalytic domain	278	712	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Aed6g1417	740	Pfam	Copper amine oxidase, N3 domain	162	266	IPR015802	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Aed6g1417	740	Pfam	Copper amine oxidase, N2 domain	36	122	IPR015800	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038
	Aed6g1417	740	SUPERFAMILY	Amine oxidase catalytic domain	285	712	IPR036460	GO:0005507\|GO:0008131\|GO:0009308\|GO:0048038

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed6g1417	Aed-Chr6	18599272	18603895	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed6g1417	K00276		-	gmx:100817454	1357.43

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed6g1417	6	18599272	18603895	Aed6g1417	6	18599272	18603895	ECH